DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4565 and Nsd1

DIOPT Version :10

Sequence 1:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001388465.1 Gene:Nsd1 / 306764 RGDID:1307748 Length:2689 Species:Rattus norvegicus


Alignment Length:253 Identity:74/253 - (29%)
Similarity:110/253 - (43%) Gaps:76/253 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EHPDGLDYILESVLMPSDGSKEFKFLADEYNSVLLNPCHCKGACENSEVCAHGGQYEFTEDGSEL 77
            |:|.|:|                   ::..|.:||..||       ..||..||:          
  Rat  1900 ENPCGID-------------------SECINRMLLYECH-------PTVCPAGGR---------- 1928

  Fly    78 ILRNSANPVIECNDMCKCCRNTCSNRLVYSGPRKHLEIFDSPVYGSKGLRTTAKITKGGYICEYA 142
                              |:|.|.::..|    ..:|||.:...| .||||...|.||.::.||.
  Rat  1929 ------------------CQNQCFSKRQY----PDVEIFRTLQRG-WGLRTKTDIKKGEFVNEYV 1970

  Fly   143 GELLTVPEARSRLHDNEKLGLMNYILVLNEYTSDKKQQVTIVDPSRRGNIGRYLNHSCEPNCHIA 207
            |||:...|.|:|:...::..:.|:.::    |.||.:   |:|...:||..|::||.|:|||...
  Rat  1971 GELIDEEECRARIRYAQEHDITNFYML----TLDKDR---IIDAGPKGNYARFMNHCCQPNCETQ 2028

  Fly   208 --AVRIDCPIPKIGIFAARDIAAKEELCFHYGGEGQYKKMTGGKT-CLCGASKCTGFM 262
              :|..|   .::|:||..||.|..||.|:|..|    .:..||| |.|||..|:||:
  Rat  2029 KWSVNGD---TRVGLFALSDIKAGTELTFNYNLE----CLGNGKTVCKCGAPNCSGFL 2079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 72/250 (29%)
Nsd1NP_001388465.1 PWWP_NSD1_rpt1 318..433 CDD:438989
TNG2 <1452..1585 CDD:227367
PHD1_NSD1_2 1543..1585 CDD:277118
PHD2_NSD1 1590..1636 CDD:277120
PHD3_NSD1 1637..1690 CDD:277123
PHD4_NSD1 1707..1746 CDD:277126
PWWP_NSD1_rpt2 1753..1848 CDD:438992
AWS 1899..1937 CDD:465559 16/90 (18%)
SET_NSD1 1939..2080 CDD:380987 58/160 (36%)
PHD5_NSD1 2118..2160 CDD:277129
C5HCH 2159..2208 CDD:465605
PHA03247 <2221..2593 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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