DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4565 and Nsd3

DIOPT Version :10

Sequence 1:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_038950324.1 Gene:Nsd3 / 290831 RGDID:1308980 Length:1444 Species:Rattus norvegicus


Alignment Length:229 Identity:71/229 - (31%)
Similarity:100/229 - (43%) Gaps:58/229 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 CHCKGACEN-----SEVCAHGGQYEFTEDGSELILRNSANPVIECN-DMCKC---CRNTCSNRLV 105
            |:||...||     ||......||                   ||: .:|..   |:|.|..:.:
  Rat  1106 CNCKPGDENPCGLESECLNRMSQY-------------------ECHPQVCPAGDRCQNQCFTKRL 1151

  Fly   106 YSGPRKHLEIFDSPVYGSKGLRTTAKITKGGYICEYAGELLTVPEARSRL---HDNEKLGLMNYI 167
            |    ...||..:...| .||||...|.||.::.||.|||:...|.|.|:   |:|.....  |:
  Rat  1152 Y----PDAEIIKTERRG-WGLRTKRSIKKGEFVNEYVGELIDEEECRLRIKRAHENSVTNF--YM 1209

  Fly   168 LVLNEYTSDKKQQVTIVDPSRRGNIGRYLNHSCEPNCHIAAVRIDCPIPKIGIFAARDIAAKEEL 232
            |.:   |.|:     |:|...:||..|::||||.|||......::..: ::|:||..||.|..||
  Rat  1210 LTV---TKDR-----IIDAGPKGNYSRFMNHSCNPNCETQKWTVNGDV-RVGLFALCDIPAGMEL 1265

  Fly   233 CFHYG----GEGQYKKMTGGKTCLCGASKCTGFM 262
            .|:|.    |.|:       ..|.|||..|:||:
  Rat  1266 TFNYNLDCLGNGR-------TVCHCGADNCSGFL 1292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 71/229 (31%)
Nsd3XP_038950324.1 PWWP_NSD3_rpt1 275..404 CDD:438991
PHD1_NSD3 711..753 CDD:277119
PHD2_NSD3 759..805 CDD:277122
PHD_SF 806..858 CDD:473978
PHD4_NSD3 925..960 CDD:277128
PWWP_NSD3_rpt2 967..1061 CDD:438994
AWS 1112..1150 CDD:465559 12/56 (21%)
SET_NSD3 1152..1293 CDD:380989 56/164 (34%)
PHD5_NSD3 1330..1372 CDD:277131
C5HCH 1371..1420 CDD:465605
Blue background indicates that the domain is not in the aligned region.

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