DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4565 and set-16

DIOPT Version :10

Sequence 1:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_499819.3 Gene:set-16 / 176802 WormBaseID:WBGene00011729 Length:2475 Species:Caenorhabditis elegans


Alignment Length:142 Identity:46/142 - (32%)
Similarity:67/142 - (47%) Gaps:16/142 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GLRTTAKITKGGYICEYAGELL--TVPEARSRLHDNEKLGLMNYILVLNEYTSDKKQQVTIVDPS 187
            ||.....|:.|.:|.||.||::  .|.|.|...:..:..|:  |:..::|        ..::|.:
 Worm  2345 GLYAKVDISMGDFIIEYKGEIIRSEVCEVREIRYVAQNRGV--YMFRIDE--------EWVIDAT 2399

  Fly   188 RRGNIGRYLNHSCEPNC--HIAAVRIDCPIPKIGIFAARDIAAKEELCFHYGGEGQYKKMTGGKT 250
            ..|...||:||||:|||  .|..........||.|.|.|.|:|.|||.:.|  :.:.:..|....
 Worm  2400 MAGGPARYINHSCDPNCSTQILDAGSGAREKKIIITANRPISANEELTYDY--QFELEGTTDKIP 2462

  Fly   251 CLCGASKCTGFM 262
            |||||..|..:|
 Worm  2463 CLCGAPNCVKWM 2474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 46/142 (32%)
set-16NP_499819.3 PHD_SF 42..84 CDD:276966
PHD4_KMT2C_like 427..477 CDD:276987
PHD5_KMT2C_like 479..524 CDD:276988
PHD6_KMT2C_like 554..604 CDD:276989
HMG_KMT2C-like 936..1002 CDD:438813
ePHD2_KMT2C_like 1904..2008 CDD:277136
FYRN 2053..2104 CDD:461787
FYRC 2112..2199 CDD:197781
SET_KMT2C_2D 2319..2474 CDD:380948 45/140 (32%)
Blue background indicates that the domain is not in the aligned region.

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