DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4565 and set-1

DIOPT Version :10

Sequence 1:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001022796.1 Gene:set-1 / 175918 WormBaseID:WBGene00004781 Length:242 Species:Caenorhabditis elegans


Alignment Length:130 Identity:41/130 - (31%)
Similarity:62/130 - (47%) Gaps:14/130 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LEIFDSPVYGSKGLRTTAKITKGGYICEYAGELLTVPEAR---SRLHDNEKLGLMNYILVLNEYT 174
            ||::...|.| :|:||.....||.::.||.|.::...||:   .:..::|::|...|....|   
 Worm   106 LEVYKDVVKG-RGIRTKVNFEKGDFVVEYRGVMMEYSEAKVIEEQYSNDEEIGSYMYFFEHN--- 166

  Fly   175 SDKKQQVTIVDPSRRGN-IGRYLNHS-CEPNCHIAAVRIDCPIPKIGIFAARDIAAKEELCFHYG 237
             :||   ..:|.::... .||.:||| ..||.....|.||.....| :.|.|.||..|||.:.||
 Worm   167 -NKK---WCIDATKESPWKGRLINHSVLRPNLKTKVVEIDGSHHLI-LVARRQIAQGEELLYDYG 226

  Fly   238  237
             Worm   227  226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 41/130 (32%)
set-1NP_001022796.1 SET_SETD8 87..228 CDD:380926 41/130 (32%)

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