DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad86C and Pcdhb4

DIOPT Version :9

Sequence 1:NP_001247033.1 Gene:Cad86C / 41302 FlyBaseID:FBgn0261053 Length:1949 Species:Drosophila melanogaster
Sequence 2:NP_444359.3 Gene:Pcdhb4 / 93875 MGIID:2136738 Length:784 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad86CNP_001247033.1 Cadherin_repeat 260..361 CDD:206637
Cadherin_repeat 372..469 CDD:206637
Cadherin_repeat 487..596 CDD:206637
Cadherin_repeat 605..703 CDD:206637
Cadherin_repeat 728..820 CDD:206637
Pcdhb4NP_444359.3 Cadherin_2 31..112 CDD:285466
Cadherin_repeat 140..238 CDD:206637
Cadherin_repeat 247..342 CDD:206637
Cadherin_repeat 355..446 CDD:206637
Cadherin_repeat 454..556 CDD:206637
Cadherin_repeat 570..663 CDD:206637
Cadherin_C_2 685..768 CDD:293101
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X20
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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