DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad86C and PCDH7

DIOPT Version :9

Sequence 1:NP_001247033.1 Gene:Cad86C / 41302 FlyBaseID:FBgn0261053 Length:1949 Species:Drosophila melanogaster
Sequence 2:XP_011512144.1 Gene:PCDH7 / 5099 HGNCID:8659 Length:1296 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad86CNP_001247033.1 Cadherin_repeat 260..361 CDD:206637
Cadherin_repeat 372..469 CDD:206637
Cadherin_repeat 487..596 CDD:206637
Cadherin_repeat 605..703 CDD:206637
Cadherin_repeat 728..820 CDD:206637
PCDH7XP_011512144.1 Cadherin_repeat 35..139 CDD:206637
Cadherin_repeat 147..304 CDD:206637
Cadherin_repeat 312..411 CDD:206637
Cadherin_repeat 429..531 CDD:206637
Cadherin_repeat 541..635 CDD:206637
Cadherin_repeat 643..738 CDD:206637
Cadherin_repeat 749..839 CDD:206637
Protocadherin 842..1053 CDD:285562
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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