DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad86C and ds

DIOPT Version :9

Sequence 1:NP_001247033.1 Gene:Cad86C / 41302 FlyBaseID:FBgn0261053 Length:1949 Species:Drosophila melanogaster
Sequence 2:NP_001285551.1 Gene:ds / 33245 FlyBaseID:FBgn0284247 Length:3556 Species:Drosophila melanogaster


Alignment Length:2251 Identity:460/2251 - (20%)
Similarity:743/2251 - (33%) Gaps:698/2251 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 SRLGPIGPWLGAMTAYRLLTISLLIGILCPHHVQGADPKFDPTTRMRLVLVPADAQVNSVIYRLR 167
            :|.|.:.|.  :.||..|:||         |.|...:|.||.:  ...|.|..:..|...|.::.
  Fly   583 ARDGGVPPL--SSTATVLVTI---------HDVNDNEPIFDQS--FYNVSVAENEPVGRCILKVS 634

  Fly   168 ATD--------------EEFDYPLTFEFVGDASASTVKVESLPCTKYNSVCQA-NIVLQRRLEPG 217
            |:|              |.|.:...||.   .|||            ..:|.| .:..:||..  
  Fly   635 ASDPDCGVNAMVNYTIGEGFKHLTEFEV---RSAS------------GEICIAGELDFERRSS-- 682

  Fly   218 RYYDFQVSVKDTKGGMTTQLCSITATNFTTPHDLIFPHK------------------PGIIMIPE 264
              |:|.|...|..|..||.:..:..|:......:.:|.:                  |.:.::..
  Fly   683 --YEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVAT 745

  Fly   265 DAKRGT--ELDYVIARKNPLFQKPVYLELWGSPLFAIRQKIVSSETTEGTVFLLGP--LDFEKQA 325
            |...|.  ::.|.|...|.            :.:|.|       :.:.|.:|::.|  |....|.
  Fly   746 DPDYGNFGQVSYRIVAGNE------------AGIFRI-------DRSTGEIFVVRPDMLSVRTQP 791

  Fly   326 MYHLTILANDAYAEPGQDSRNIAGMEIVVIVQDVQDQPPVFTSAPPVTKLPPGILPGDKILQVHA 390
            |:.|.|.|.|     |.:.|:.|...:.:.:.|...:||:|..|.....:...|..|..:..|.|
  Fly   792 MHMLNISATD-----GGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIA 851

  Fly   391 EDGDKGNPREVRYGLVSENNPFTSFFDINETSGEIFLMRPLEDIAFITHVGDPVLLTVIAEEVKV 455
            ..||..:...|||.:.| .:| ..:|.|...||.|.:.:||:..|     ...|||.:   :..:
  Fly   852 ASGDVAHRSPVRYSIYS-GDP-DGYFSIETNSGNIRIAKPLDHEA-----KSQVLLNI---QATL 906

  Fly   456 GRDEPPALASTVQLAFFLPDRTNSPPYFENDHYVSRVDENAPHGTALTFVDPYVPRVYDDDTGKN 520
            |  |||....| |:...:.|..::.|.||.......|.|:|..|..|     |....:|.|:|.:
  Fly   907 G--EPPVYGHT-QVNIEVEDVNDNAPEFEASMVRISVPESAELGAPL-----YAAHAHDKDSGSS 963

  Fly   521 G--VFSLTLLNNNGTFEISPNVAERSAGFLIRVRDNSMLDYEQQQSVQFQILAQELGP---ATNL 580
            |  .:||...:..|.|.|     :..:|.||.   :..||||..|.....:.|.:.|.   :|||
  Fly   964 GQVTYSLVKESGKGLFAI-----DARSGHLIL---SQHLDYESSQRHTLIVTATDGGVPSLSTNL 1020

  Fly   581 SALVNVTVYINDVNDNAPVFEQPAYSVELPENMTAGTKVVQVLATDPDSGLGGKVRYTAILGYLN 645
            :.||:|    .|||||.||||:..|||.:.|:.:...:::||.|:|.|:|...::.|..:     
  Fly  1021 TILVDV----QDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIV----- 1076

  Fly   646 TSLNLDAETGLITVSTNKHGF---------------DREVMPEYHLYVEARDMDGEGNRAQVPLI 695
             ...:|..|..|:.|.....|               |||....|.|.|.|.|.......|:..:|
  Fly  1077 -DAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVI 1140

  Fly   696 IKLIDVNDETPIFDKDLYEFILTHDLMGFTTTAVIHAEDKDATAPNNEVRYEIINGNYDNQFVLD 760
            ::::|.||..|.|.|..|||.:..:|...:...|:.|.|.| ...|..:||.::..|  :.|.:.
  Fly  1141 VRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLLPIN--SSFQVH 1202

  Fly   761 KVTGELTVREKIHLRSKKNAKTRRRRQAGSDDEDTDIFILTARAYDLGVPVRFSTTTIRVYPPES 825
            .||||::.||.:                  |.|..:::.|...|.|.|.|||.:...:|::..:.
  Fly  1203 PVTGEISTREPL------------------DRELRELYDLVVEARDQGTPVRSARVPVRIHVSDV 1249

  Fly   826 RKRSVKFVVPGHNPDKAKTEE----------------------TLSALSGGKVYIHNIRPLSPDE 868
            ...:.:...|..:....:.|:                      |.|.:.|.....|.:..:.|..
  Fly  1250 NDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTS 1314

  Fly   869 P------------------GAKDIPAGNPGIKERSVVTATVI--------YDSSSVV-------- 899
            .                  |......|||..:...::...|:        :.|||:|        
  Fly  1315 GVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAA 1379

  Fly   900 ------DISEIQQRLSHHNNSYAIMPQDTSSTDTLTPLQTQYKAENKVLFWLLILLA-------- 950
                  .||.|::......||.....:|...|.||.||...           ||..|        
  Fly  1380 LGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKD-----------LIEAAFDIDRHSG 1433

  Fly   951 TLVALTIL-----------ILLLCCICSWCPLYGAATKRI----VNISRTE---DDVHL------ 991
            .||...:|           |..|....|..|...|.|.:|    ||.:..|   |.:.|      
  Fly  1434 NLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEAT 1498

  Fly   992 -----VHREMANGKQT------------------KSVQVAEWMGRRD----AWSAEKPPD----- 1024
                 :|...|....|                  :|.:.|..:.|.|    |.|.:.|.|     
  Fly  1499 PVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQ 1563

  Fly  1025 ------------------TRTKPT-RWEFHDGREQ------------------------------ 1040
                              .:|..| |....|..:.                              
  Fly  1564 EYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVA 1628

  Fly  1041 ----LDEDVG-RGQ---DI----GEGDRRHIQS--------------AEEQQRRVRIKHNRTAKD 1079
                :|||.| .||   :|    ||| |..|.|              .|:.::..|......|||
  Fly  1629 HIVAVDEDSGDNGQLTYEITGGNGEG-RFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKD 1692

  Fly  1080 -----------DLHL---NFHNSRTNLINDRDVYMEDVIENRDLAGDREHITRTRVNRQEYARRK 1130
                       :|||   ..||:....:  :.||...::||.........:|...::..|.| ..
  Fly  1693 HGQPEPKKSSLNLHLIVQGSHNNPPRFL--QAVYRATILENVPSGSFVLQVTAKSLHGAENA-NL 1754

  Fly  1131 QYD------SEVRHIDDDS---MRRHEIDRGSDIDFNTAHNSLKSKRELFIKDGNVE-------I 1179
            .|:      :::.|:|...   ..|.:.||.|...:         ...::::|.|.:       :
  Fly  1755 SYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASY---------VLPVYVRDANRQSTLSSSAV 1810

  Fly  1180 LQLMTRDK---TRDGLNLDDDNIYVNVPLKPAGNLSHPQLLMVDNTGKEILMRRFIEEQPDGKQI 1241
            .:..:.|.   |.:|.:.|...||:.|     |:::       ||:             |:.:  
  Fly  1811 RKQRSSDSIGDTSNGQHFDVATIYITV-----GDVN-------DNS-------------PEFR-- 1848

  Fly  1242 IREHYQIVPGATYIQSMPNEVQQG---STLKGDTFPLGKSGPNS-IVYS---------------- 1286
                    ||:.|..|:|...:.|   :.:..|.    ..|||: ::||                
  Fly  1849 --------PGSCYGLSVPENSEPGVIHTVVASDL----DEGPNADLIYSITGGNLGNKFSIDSSS 1901

  Fly  1287 ------QLEPEVKVIHTQPVQAGE-------------GVSLDQQMQ--PAVSNQSLTHELEHSLK 1330
                  .|:.|....:|..:||.:             .:.::.|..  |.......|..::....
  Fly  1902 GELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAP 1966

  Fly  1331 QQNALLRQILMEKEKLENAYTQHEVALETQ---SLPGQSMAIGTQTDCDAGTQTE------GFDG 1386
            ...::::...::.:...||...:.:|.|||   ::.|||..|.|....|...|..      ..||
  Fly  1967 LGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDG 2031

  Fly  1387 VLDPEISLAKPSRRRARSENDESMSEDGYEYVRFNPPNSPEGVYWIKRRRTKKRPRQPRKRIVMV 1451
            ......|...|.:......||.....:.|.|:...|...                 ||.:.::.|
  Fly  2032 GRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALI-----------------QPGQTLLKV 2079

  Fly  1452 EEV------KRKIRTPIKEEEEVQERKKRVPPKKPLRETKTSI---------LRKQLSDESRKDQ 1501
            :.:      ..:|...:..|......|.|:.|.........|:         |.....|:....|
  Fly  2080 QALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQ 2144

  Fly  1502 SR-------NGESQTGN---RHRSESDSHNRDMFMEITDS------MDELASPGSHSIRKIQVEK 1550
            |.       .||:..|.   |.::|:   .|.|..|.:.|      :..|.|.|..  :|:|   
  Fly  2145 SSLGLIELLIGEAPQGTPVLRFQNET---YRVMLKENSPSGTRLLQVVALRSDGRR--QKVQ--- 2201

  Fly  1551 YYKHSDGDFDEDDTEYSIDSDGDEIVIRTNYPSRAQENERYRRQERTYAEPENPVDRKRPARKSS 1615
               .|.|..:||.. .|:||...|  ||.|.| ...:.:|:                      |:
  Fly  2202 ---FSFGAGNEDGI-LSLDSLSGE--IRVNKP-HLLDYDRF----------------------ST 2237

  Fly  1616 PTDSQPEAMPRLSR-RDSSKRGSRKQTSSEPPHNRVSISKYESTVTENGRKLMSTSTEIVGSK-- 1677
            |      :|..||| |.........::|.|.|:|.          |.:.|.|.|:|..:..|:  
  Fly  2238 P------SMSALSRGRALHYEEEIDESSEEDPNNS----------TRSQRALTSSSFALTNSQPN 2286

  Fly  1678 --------RSLTDRSYQSETELA-GLEHEERNVPKYMEWYYNKKKSSVSGRTSTESSKSQPSSKK 1733
                    |:.......|..||. .||.|..|.||:                         |.|:
  Fly  2287 EIRVVLVARTADAPFLASYAELVIELEDENDNSPKF-------------------------SQKQ 2326

  Fly  1734 KVGAAEKRVSKTRITAQPKDVEEYDETGG-----RYKPEPAPRKS----PPKGSRLLKE----DR 1785
            .|....:..:|....||   |..:|...|     ||........:    .|..|.:::.    ||
  Fly  2327 FVATVSEGNNKGTFVAQ---VHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDR 2388

  Fly  1786 ALNKQHKPK-IETDTNHPLLQHSEHRFERENALEVPAAPTKLPHYMYPETPPH---AAAGGKESK 1846
            .:...:|.| |.||...|  |.:.....|...::|        :...|..||:   ..:...|..
  Fly  2389 EIRDIYKLKIIATDEGVP--QMTGTATIRVQIVDV--------NDNQPTFPPNNLVTVSEATELG 2443

  Fly  1847 SGRESKTSKEAKPKPSPI----RENEVKVSNSKIYVEHRGTGHPTQKQLNASTLEDDHDSGIAMN 1907
            :...|.::.:....|:..    .|:.|.:.|..|:...|.:|....|:.....|:.:::..:..:
  Fly  2444 AVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIAS 2508

  Fly  1908 SLLNSLGRRNPIAEKKSVFSIAYDDVSRVKKINSGGESPQY 1948
            ...:         |.::|.::..:|.:....:....:.|.|
  Fly  2509 DAAH---------EARTVLTVRVNDENDNAPVFLAQQPPAY 2540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad86CNP_001247033.1 Cadherin_repeat 260..361 CDD:206637 21/104 (20%)
Cadherin_repeat 372..469 CDD:206637 27/96 (28%)
Cadherin_repeat 487..596 CDD:206637 34/113 (30%)
Cadherin_repeat 605..703 CDD:206637 27/112 (24%)
Cadherin_repeat 728..820 CDD:206637 24/91 (26%)
dsNP_001285551.1 CA 111..172 CDD:214520
Cadherin_repeat 178..282 CDD:206637
Cadherin_repeat 291..389 CDD:206637
Cadherin_repeat 406..500 CDD:206637
Cadherin_repeat 509..607 CDD:206637 10/34 (29%)
Cadherin_repeat 616..711 CDD:206637 25/113 (22%)
Cadherin_repeat 719..820 CDD:206637 21/124 (17%)
Cadherin_repeat 832..927 CDD:206637 29/107 (27%)
Cadherin_repeat 937..1032 CDD:206637 34/111 (31%)
Cadherin_repeat 1040..1149 CDD:206637 28/114 (25%)
Cadherin_repeat 1158..1252 CDD:206637 29/114 (25%)
Cadherin_repeat 1263..1361 CDD:206637 11/97 (11%)
Cadherin_repeat 1369..1481 CDD:206637 28/122 (23%)
Cadherin_repeat 1489..1598 CDD:206637 16/108 (15%)
Cadherin_repeat 1614..1710 CDD:206637 21/96 (22%)
Cadherin_repeat 1723..1843 CDD:206637 24/141 (17%)
Cadherin_repeat 1853..1948 CDD:206637 16/98 (16%)
Cadherin_repeat 1957..2053 CDD:206637 19/95 (20%)
Cadherin_repeat 2061..2154 CDD:206637 15/109 (14%)
Cadherin_repeat 2170..2318 CDD:206637 46/200 (23%)
Cadherin_repeat 2326..2424 CDD:206637 22/110 (20%)
Cadherin_repeat 2434..2528 CDD:206637 14/102 (14%)
Cadherin_repeat 2549..2641 CDD:206637
Cadherin_repeat 2652..2748 CDD:206637
Cadherin_repeat 2758..2858 CDD:206637
Cadherin_repeat 2866..2960 CDD:206637
Cadherin_repeat 2985..3071 CDD:206637
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24026
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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