Sequence 1: | NP_001247033.1 | Gene: | Cad86C / 41302 | FlyBaseID: | FBgn0261053 | Length: | 1949 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510685.2 | Gene: | cdh-9 / 186608 | WormBaseID: | WBGene00000401 | Length: | 623 | Species: | Caenorhabditis elegans |
Alignment Length: | 598 | Identity: | 123/598 - (20%) |
---|---|---|---|
Similarity: | 204/598 - (34%) | Gaps: | 217/598 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 488 YVSRVDENAPHGTALTFVDPYVPRVYDDDTGKNGVFSLTLLNNNGTFEISPNVAERSAGFLIRV- 551
Fly 552 --RDNSMLDYEQQQSVQFQILAQELGPATNLSAL-VNVTVYINDVNDNAPVFEQPAYSVELPENM 613
Fly 614 TAGTKV-VQVLATDPDS-GLGGKVRYTAILGYLNTSLNL-DAETGLITVSTNKHGFDREVMPEYH 675
Fly 676 LYVEARDMDGEGNRAQVPLIIKLIDVNDETPIF-------------------------DKDLYEF 715
Fly 716 ILTHDLMG---------------------------FTTTAVIHAEDKDATA-------------- 739
Fly 740 --------PNNEVRYEIIN--GNYDNQFVL-------------DKVTGELTVREKIHLRSKKNAK 781
Fly 782 TRRRRQAGSDDED---TDIFILTARAYDLGVPVRFSTTTIRVYPPESRKRSVKFVVPGHNPDKAK 843
Fly 844 TEETLSALSGGKVYIHNIRPLSPDEPGAKDIPAGNPGIKERSVVTATVIYDSSSVVDISEIQQRL 908
Fly 909 SHHNNSYAIMPQDTSSTDTLTP---LQ------------------TQYKAENKVLFWLLILLATL 952
Fly 953 VALTILILLLCCI 965 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad86C | NP_001247033.1 | Cadherin_repeat | 260..361 | CDD:206637 | |
Cadherin_repeat | 372..469 | CDD:206637 | |||
Cadherin_repeat | 487..596 | CDD:206637 | 22/111 (20%) | ||
Cadherin_repeat | 605..703 | CDD:206637 | 30/100 (30%) | ||
Cadherin_repeat | 728..820 | CDD:206637 | 19/131 (15%) | ||
cdh-9 | NP_510685.2 | E_set | <80..129 | CDD:298831 | 13/54 (24%) |
Cadherin_repeat | 135..234 | CDD:206637 | 30/101 (30%) | ||
Cadherin_repeat | 338..>405 | CDD:206637 | 12/73 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S7733 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X20 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.950 |