DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad86C and CDH18

DIOPT Version :9

Sequence 1:NP_001247033.1 Gene:Cad86C / 41302 FlyBaseID:FBgn0261053 Length:1949 Species:Drosophila melanogaster
Sequence 2:NP_001278885.1 Gene:CDH18 / 1016 HGNCID:1757 Length:790 Species:Homo sapiens


Alignment Length:708 Identity:181/708 - (25%)
Similarity:284/708 - (40%) Gaps:161/708 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 GTVFLLG----------PLDFEKQAMYHLTILANDAYAEPGQDSRNIAGMEIVVIVQDVQDQPPV 365
            ||:|::.          .||.|::..|.|...|.|.......:..:    |.::.|||:.|..|.
Human    98 GTIFIIDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPES----EFIIKVQDINDNAPK 158

  Fly   366 FTSAPPVTKLPPGILPGDKILQVHAEDGDK---GNPREVRYGLVSENNPFTSFFDINETSGEIFL 427
            ||..|.:..:|.....|..:|||.|.|.|.   ||...|.|.:: :..|   :|.::..:|.|..
Human   159 FTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSIL-QGQP---YFSVDPKTGVIRT 219

  Fly   428 MRPLEDIAFITHVGDPVLLTVIAEEV--KVGRDEPPALASTVQLAFFLPDRTNSPPYFENDHYVS 490
            .....|.....|..    :.:.|:::  :||     .|:.:..:...|.|..::||.|...||..
Human   220 ALHNMDREAREHYS----VVIQAKDMAGQVG-----GLSGSTTVNITLTDVNDNPPRFPQKHYQL 275

  Fly   491 RVDENAPHGTALTFVDPYVPRVYDDDTGKNGVFSLTLLNNN--GTFEISPNVAERSAGFLIRVRD 553
            .|.|:|..|:|:..:     :..|.|||.|...:.:::|.:  |.|.||.:...|.....::   
Human   276 YVPESAQVGSAVGKI-----KANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLK--- 332

  Fly   554 NSMLDYEQQQSVQFQILA---------QELGPATNLSALVNVTVYINDVNDNAPVFEQPAYSVEL 609
             ..|:||:::|....|..         ..|||..:.:.|   .:.:.|| |..|:|..|:|.:|:
Human   333 -KPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATML---KIIVGDV-DEPPLFSMPSYLMEV 392

  Fly   610 PENMTAGTKVVQVLATDPDSGLGGKVRYTAILGYLNTSL------NLDAETGLITVSTNKHGFDR 668
            .||...||.|..|||.|||| ....|||     ::|.::      |:||.||  |:.|.| ..||
Human   393 YENAKIGTVVGTVLAQDPDS-TNSLVRY-----FINYNVEDDRFFNIDANTG--TIRTTK-VLDR 448

  Fly   669 EVMPEYHLYVEARDMDGEGNRAQVPLIIKLIDVNDETPIFDKDLYEFILTHDLMGFTTTAVIHAE 733
            |..|.|::.|.|.::|.....:.|.:.|:::||||..|...:: |:.|:..:.........|.|.
Human   449 EETPWYNITVTASEIDNPDLLSHVTVGIRVLDVNDNPPELARE-YDIIVCENSKPGQVIHTISAT 512

  Fly   734 DKDATAPNNEVRYEIINGNYDNQFVLDKVTGELTVREKIHLRSKK----NAKTRRRRQAGSDDED 794
            |||          :..||...| |.||:   .|.|.....|:..:    :..|||||.:.:..  
Human   513 DKD----------DFANGPRFN-FFLDE---RLPVNPNFTLKDNEDNTASILTRRRRFSRTVQ-- 561

  Fly   795 TDIFILTARAYDLGVP--VRFSTTTIRVYPPE--------------------------------- 824
             |::.|.....|.|:|  ...||.||||...|                                 
Human   562 -DVYYLPIMISDGGIPSLSSSSTLTIRVCACERDGRVRTCHAEAFLSSAGLSTGALIAILLCVLI 625

  Fly   825 ---------SRKRSVKFVVPGHNPDKAKTEETLSALSGGKVYIHNIRPLSPDEPGAKDIPA-GNP 879
                     :.:||.|..:.....|..:...|.....||:           ::..|.||.| .||
Human   626 LLAIVVLFITLRRSKKEPLIISEEDVRENVVTYDDEGGGE-----------EDTEAFDITALRNP 679

  Fly   880 GIKE--------RSVVTATVIYDSSSV---VDISE-IQQRLSHHNNSYAIMPQDTSST 925
            ...|        |..|..|..:.:||.   :|:.| |:|||:..:...::.|.|:..|
Human   680 SAAEELKYRRDIRPEVKLTPRHQTSSTLESIDVQEFIKQRLAEADLDPSVPPYDSLQT 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad86CNP_001247033.1 Cadherin_repeat 260..361 CDD:206637 14/59 (24%)
Cadherin_repeat 372..469 CDD:206637 22/101 (22%)
Cadherin_repeat 487..596 CDD:206637 29/119 (24%)
Cadherin_repeat 605..703 CDD:206637 38/103 (37%)
Cadherin_repeat 728..820 CDD:206637 28/97 (29%)
CDH18NP_001278885.1 CA 79..157 CDD:214520 15/62 (24%)
Cadherin_repeat 163..264 CDD:206637 25/113 (22%)
Cadherin_repeat 272..379 CDD:206637 29/119 (24%)
Cadherin_repeat 387..484 CDD:206637 39/105 (37%)
Cadherin_repeat 491..589 CDD:206637 31/115 (27%)
Cadherin_C 637..783 CDD:307269 28/112 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7733
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.950

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