DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14692 and RIF1

DIOPT Version :9

Sequence 1:NP_650019.6 Gene:CG14692 / 41298 FlyBaseID:FBgn0037836 Length:2851 Species:Drosophila melanogaster
Sequence 2:NP_060621.3 Gene:RIF1 / 55183 HGNCID:23207 Length:2472 Species:Homo sapiens


Alignment Length:1842 Identity:352/1842 - (19%)
Similarity:717/1842 - (38%) Gaps:386/1842 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 IEYSKYS-SYEKSLKDKEHLAPATKVTCE-CGRVLSANRKDVENTASVYT-DNKLAEAD------ 179
            |::|.|: .|:..:|..:..:..:|...| .|::.|..:..|:...|.:| ..|.|.:|      
Human   767 IDFSPYNIKYQPKVKSPQRPSDWSKKKNEPLGKLTSLFKLIVKVIYSFHTLSFKEAHSDTLFTIG 831

  Fly   180 ---QREFSSRISYIQSVVIIQRHFRRYLNERKIGRDKDKCNSVDYVAAILLIQRQVRRYLAKKRV 241
               ....||.:.:|....:|::.|........:..:..|.:.|..|.:.|  ..::.:.|. :.:
Human   832 NSITGIISSVLGHISLPSMIRKIFATLTRPLALFYENSKLDEVPKVYSCL--NNKLEKLLG-EII 893

  Fly   242 AELKNSRDAQKADAKPKAADYMKAVVVIQRHYRIYLKKKQEQNRLKHGPVSLATAAIIIQRAY-- 304
            |.|:.|..........:....:..::.:.::.:|..:..|..|         ||.|.::...|  
Human   894 ACLQFSYTGTYDSELLEQLSPLLCIIFLHKNKQIRKQSAQFWN---------ATFAKVMMLVYPE 949

  Fly   305 --RRMVARHKAKRTTSI-GTDQAEELNDNASETGSYTSVSTALLSTESTELG--MANFEERVHQK 364
              :.::.:.|.|....: |.:..|.:.::   :|.|:.      .||:::|.  ::..|.:.:.|
Human   950 ELKPVLTQAKQKFLLLLPGLETVEMMEES---SGPYSD------GTENSQLNVKISGMERKSNGK 1005

  Fly   365 ----IIHEDEEVENSNVDAGLRKEYFAETIKG-----EQKSINL---------RKSEILSGALIE 411
                :.....:.||....|.|:.|..:..:||     |:||.:.         .|..||:....|
Human  1006 RDSFLAQTKNKKENMKPAAKLKLESSSLKVKGEILLEEEKSTDFVFIPPEGKDAKERILTDHQKE 1070

  Fly   412 SMICK----PDLQNIKDLNNE------SKEIDVELEVNEHQPAKLEEHITDEKKTI--QDSESEL 464
            .:..|    |.:.|..|::.:      |:|..:|:.....:|.:      |.|..|  :..:|::
Human  1071 VLKTKRCDIPAMYNNLDVSQDTLFTQYSQEEPMEIPTLTRKPKE------DSKMMITEEQMDSDI 1129

  Fly   465 IVDNKTSLDLETLSQVEVKAENKSKDYKSASEDQLKSNK--SLDAEQETHVDSKDKPLANDLDDA 527
            ::....:.|......:|              :..|.:|:  |||         |..|        
Human  1130 VIPQDVTEDCGMAEHLE--------------KSSLSNNECGSLD---------KTSP-------- 1163

  Fly   528 IKAEDSSSDLLRENREEDSALHRNTEKKESEDVQENIVESAIASSNNARN----------VEKED 582
               |.|:|:    |.|...||  .:.:|.|.:...:...|.:.||::..|          ..:..
Human  1164 ---EMSNSN----NDERKKAL--ISSRKTSTECASSTENSFVVSSSSVSNTTVAGTPPYPTSRRQ 1219

  Fly   583 EIIPLPKIQNSKSQLQEISLKNKITPTVSIEIEHVEDILE-----------------DSSASPND 630
            ..|.|.|...|:::....|..|.|:.||::: .:.|.:::                 ||....|.
Human  1220 TFITLEKFDGSENRPFSPSPLNNISSTVTVK-NNQETMIKTDFLPKAKQREGTFSKSDSEKIVNG 1283

  Fly   631 SKADDLTEGIS-----------VTEEPKSIPNVEVDSLKSILINHNLEGCEQETSAETIVDINFE 684
            :|......|.:           :..||:......|:.:  :::.:|..|...:|  |.:.|....
Human  1284 TKRSSRRAGKAEQTGNKRSKPLMRSEPEKNTEESVEGI--VVLENNPPGLLNQT--ECVSDNQVH 1344

  Fly   685 AAAAKQDIDSNEMIQSSDTHEKIREKRSIEYEDNVQLNSDSQN-----VLIAESPIDQE-QLKIN 743
            .:.:..:.|:.::..::..:..:.|..::| |.||::|.:|:.     |:.|:..:::: |::|.
Human  1345 LSESTMEHDNTKLKAATVENAVLLETNTVE-EKNVEINLESKENTPPVVISADQMVNEDSQVQIT 1408

  Fly   744 -NDQTLELD--RKPEIIPKVEDVPKTTPNTKDDEVSGSTEKLEMNKEE--PLDET-VELSNHEIT 802
             |.:||...  |:.|::       ::|..::|.|  .|.:|.|..|||  ||.:: :.:.:..:.
Human  1409 PNQKTLRRSSRRRSEVV-------ESTTESQDKE--NSHQKKERRKEEEKPLQKSPLHIKDDVLP 1464

  Fly   803 LSKVL--KTVSENKQERMEDLPSEDKIVKDSTSSLAEDSKMPEAKKESKSID--ELETTKEVLED 863
            ..|::  :|:.||..|:..:|..:         :|.|.|...|.::..|..|  .:::..:..:|
Human  1465 KQKLIAEQTLQENLIEKGSNLHEK---------TLGETSANAETEQNKKKADPENIKSEGDGTQD 1520

  Fly   864 IIHS------------ETDLSKQNIKENVEETDKPQSD---------------DSPKELENLKDK 901
            |:..            :|..:.|.:..::|.::...|:               :...|..:::|:
Human  1521 IVDKSSEKLVRGRTRYQTRRASQGLLSSIENSESDSSEAKEEGSRKKRSGKWKNKSNESVDIQDQ 1585

  Fly   902 IKMLTQEEVTPIEPESLETKGLLSTD---------KNDKNSLFSKTNSEENNNESQNVDDITEKT 957
            .:.:.::|....|.:|.:.|.....|         |.|:::.....:|...::..|..||:....
Human  1586 EEKVVKQECIKAENQSHDYKATSEEDVSIKSPICEKQDESNTVICQDSTVTSDLLQVPDDLPNVC 1650

  Fly   958 DLKNEKHLLASHISVTSSGIDDNDIQNTAASAELSVIDG--DISIRES----------------- 1003
            :.|||....|.: |.||..:.:::::...|...|...|.  :.|:.||                 
Human  1651 EEKNETSKYAEY-SFTSLPVPESNLRTRNAIKRLHKRDSFDNCSLGESSKIGISDISSLSEKTFQ 1714

  Fly  1004 --ETKHVENREEMASTNLD----SDQVENMKLEG---------EIGQLKTVFEQSEEKTSPTKSE 1053
              |.:|..:|....|...|    ..|.:...|.|         ||.:.|....|:....|.|...
Human  1715 TLECQHKRSRRVRRSKGCDCCGEKSQPQEKSLIGLKNTENNDVEISETKKADVQAPVSPSETSQA 1779

  Fly  1054 SLHAEDRKISGKSKESLE-DAGDENRAVEE--IIDITENDRSTLLENLPS---SEKENSTSLDEN 1112
            :.::|.:.:......:.. ...::|..:.:  |:..|::..:|:.|:|||   :.:|....:|.:
Human  1780 NPYSEGQFLDEHHSVNFHLGLKEDNDTINDSLIVSETKSKENTMQESLPSGIVNFREEICDMDSS 1844

  Fly  1113 PLPEKESTSLDEKPSSGTEKST---SLDEKSSSEKEKSTSLDEKPSSEKEKSTSLDETPSSEKEN 1174
                 |:.||:.:.|......|   .|.:..:..:|...:.:|||....:...||:..  :.:.|
Human  1845 -----EAMSLESQESPNENFKTVGPCLGDSKNVSQESLETKEEKPEETPKMELSLENV--TVEGN 1902

  Fly  1175 STSLDEKPSPEKESTSL---DEKPSSGTEKS-TSLDEKSSSEKEK---STSLDEKPSSEKEKSTS 1232
            :..:.|....:.::..|   :|....|.|:: |.:.|:::.|:.|   .:..|....:.||.:| 
Human  1903 ACKVTESNLEKAKTMELNVGNEASFHGQERTKTGISEEAAIEENKRNDDSEADTAKLNAKEVAT- 1966

  Fly  1233 LNERPSSEKENSTSLVENPSPEK--ESTSLDEKPSSG-TEKSTSLDENPSSEKEKSTSLNERP-- 1292
                  .|..:..||.:|.:|.|  ..|.:.|:.::| .:....:.:..|||:..:...|...  
Human  1967 ------EEFNSDISLSDNTTPVKLNAQTEISEQTAAGELDGGNDVSDLHSSEETNTKMKNNEEMM 2025

  Fly  1293 ------------SSEKENSTSQDEKP-SSETEKSTS-LDEKPSSEKEKSTSLDGKPSSEKEKSTS 1343
                        .:|.|..|::..|| .:||...|: :|.......|.||. :|...:.|.: |:
Human  2026 IGEAMAETGHDGETENEGITTKTSKPDEAETNMLTAEMDNFVCDTVEMSTE-EGIIDANKTE-TN 2088

  Fly  1344 LDENPSSEK-EKSTSLNERPSSEKENSTS-LVENPSPEKESTSLDEKPSSGTEKSTSLDENPSSE 1406
            .:.:.|.|| :.:..:.|....::::.|| .||.||         :..:|||..|..:.|:.::.
Human  2089 TEYSKSEEKLDNNQMVMESDILQEDHHTSQKVEEPS---------QCLASGTAISELIIEDNNAS 2144

  Fly  1407 KEKSTSLNERPSSEKENSTSQDEKPSSEKEK---STLLDKNTDLMRDLIQVSQKVDEEMSKGKAA 1468
            .:|...|:  ||     ..|.::.||..:.:   |.|...:|.:::..::.||  ::|:|.....
Human  2145 PQKLRELD--PS-----LVSANDSPSGMQTRCVWSPLASPSTSILKRGLKRSQ--EDEISSPVNK 2200

  Fly  1469 IAVVDLPDINKGESVNSPLEKKPS-----SQELEDIQAELSTDKETGEPYNLSAEKHSESETSNK 1528
            :..|...|......:...::::.|     |.....|...:.|...|...:|.::.|...|..|..
Human  2201 VRRVSFADPIYQAGLADDIDRRCSIVRSHSSNSSPIGKSVKTSPTTQSKHNTTSAKGFLSPGSRS 2265

  Fly  1529 PNNTTSKE-IEGEDSRDH--TKVEPISKKTIETTDVVDVGLKGNDDPSKPGKTETAATKSVSPDI 1590
            |...:||: :..|.:::.  ...|.:....:.....||:.|        |..|.....:.:...|
Human  2266 PKFKSSKKCLISEMAKESIPCPTESVYPPLVNCVAPVDIIL--------PQITSNMWARGLGQLI 2322

  Fly  1591 KDKDTLKLKPDDDSPQKSEVITAELQLKSFKTPNDDGAWYDIYVEPKITAERDLFVPPAPIETKR 1655
            :.|: :|...|..:...||:.|  |.::|.|..|...| ..||.|.::.......:|...|..|.
Human  2323 RAKN-IKTIGDLSTLTASEIKT--LPIRSPKVSNVKKA-LRIYHEQQVKTRGLEEIPVFDISEKT 2383

  Fly  1656 PNSAKEVASVVEEPMIISERTPSYYTPKEIVESVK---PKPKNSV----SFFVSFDSDD-----G 1708
            .|..:..:...:|..::|          :|::.|.   |..||.:    :..:..||:|     |
Human  2384 VNGIENKSLSPDEERLVS----------DIIDPVALEIPLSKNLLAQISALALQLDSEDLHNYSG 2438

  Fly  1709 KPKYKIPKRFQSQSN---KNAQ 1727
            ...:::.::....:|   ||.|
Human  2439 SQLFEMHEKLSCMANSVIKNLQ 2460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14692NP_650019.6 DD_R_PKA 9..43 CDD:295380
DD_R_PKA 82..120 CDD:295380
LRIF1 <1113..1428 CDD:292369 74/345 (21%)
RIF1NP_060621.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
Rif1_N 20..361 CDD:289035
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1145..1192 17/86 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1265..1318 7/52 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1398..1464 18/74 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1479..1587 16/116 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1762..1782 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1846..1889 9/42 (21%)
Interaction with condensed chromosomes in telophase 1924..2472 123/586 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1992..2021 5/28 (18%)
Interaction with ERCC6. /evidence=ECO:0000269|PubMed:29203878 2170..2446 58/299 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2227..2269 9/41 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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