DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm5 and PRL

DIOPT Version :9

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001190655.1 Gene:PRL / 828153 AraportID:AT4G02060 Length:716 Species:Arabidopsis thaliana


Alignment Length:745 Identity:251/745 - (33%)
Similarity:367/745 - (49%) Gaps:115/745 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NFGGDNQQDAQINLQAVKKKYKEFIRTFNEENFFYKYRDTLKRNYLNGRYF--LEIEMEDLVGF- 75
            :|.||            |...|.|:..|.:.|...||.:.|:.  ::.|..  ::::::||..: 
plant     5 DFDGD------------KGLAKGFLENFADANGRSKYMEILQE--VSNRKIRAIQVDLDDLFNYK 55

  Fly    76 --DETLADKLNKQPTEHLEIFEEAAREVADEITA--PRPEHE----------------------- 113
              .|....:|.:....::.||..|..|:..|.|.  |..:|:                       
plant    56 DESEEFLGRLTENTRRYVSIFSAAVDELLPEPTEAFPDDDHDILMTQRADDGTDNPDVSDPHQQI 120

  Fly   114 ----EHMHDIQILLSSNANPTNIRQLKSDCVSKLVKIAGIIVAASGISAKATRMSIQCLSCSTVI 174
                :..:::.....|...|:.||::|:..:.:||:|:||:...|.:..........|..|    
plant   121 PSEIKRYYEVYFKAPSKGRPSTIREVKASHIGQLVRISGIVTRCSDVKPLMAVAVYTCEDC---- 181

  Fly   175 PNLKVNPGLEGYA-------LPR-KCNT------EQAGRPKCPLDPFFIMPDKCKCVDFQTLKLQ 225
                   |.|.|.       :|. ||.:      .:||.|       .:.....|.:.||..|:|
plant   182 -------GHEIYQEVTSRVFMPLFKCPSSRCRLNSKAGNP-------ILQLRASKFLKFQEAKMQ 232

  Fly   226 ELPDFVPQGEIPRHLQLFCDRSLCERVVPGNRVLIQGIY-SIRKVGKPSRRDGREKAVVGVRAPY 289
            ||.:.||:|.|||.:.:.....|..:|.||:.|...||: .|...|..:.|.|.      |...|
plant   233 ELAEHVPKGHIPRSMTVHLRGELTRKVSPGDVVEFSGIFLPIPYTGFKALRAGL------VADTY 291

  Fly   290 MRVVGITVDSEGAGAISRYS--NITSDEEEHFRRMAASGDIYERLSQSLAPSIFGSRDIKKAITC 352
            :....:|...:      :|.  ....||||...|:|..||||.:||:||||.|:|..|||||:..
plant   292 LEATSVTHFKK------KYEEYEFQKDEEEQIARLAEDGDIYNKLSRSLAPEIYGHEDIKKALLL 350

  Fly   353 MLFGGSRKRLPDGLCRRGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMK 417
            :|.|...::|.||:..|||:::.|:||||.|||||||.:..|||..|||:|||||..||||:||:
plant   351 LLVGAPHRQLKDGMKIRGDVHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGLTAAVMR 415

  Fly   418 DPQTRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVL 482
            |..|...|:||||:||||.|:..|||||||.|.||.||||.|||||:|||||||||:||:|.:||
plant   416 DQVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVL 480

  Fly   483 AAANSIFGRWDDTK-GEENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHIINVHLSSNKSAPS 546
            ||||..:||:|..: ..|||:..|.:|||||:::::.|..|...|:.||||:::||.:....|..
plant   481 AAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLELAKHVLHVHQTEESPALG 545

  Fly   547 -EPAEGEISLSTFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVR 610
             ||.|..|    .:.||...|     |||.....:|: .|:.....:.:||:|.........|||
plant   546 FEPLEPNI----LRAYISAAR-----RLSPYVPAELE-EYIATAYSSIRQEEAKSNTPHSYTTVR 600

  Fly   611 QLEAVIRISESLAKIRLQPFATDEHVNEALRLFQVSTLDA-AMTGSLAGAEGFTTEEDQETLNRI 674
            .|.:::|||.:||::|.........|:|||||.|:|.:.. |.....||.:..:   |..::.|.
plant   601 TLLSILRISAALARLRFSESVAQSDVDEALRLMQMSKISLYADDRQKAGLDAIS---DTYSIIRD 662

  Fly   675 EKQLKRRFAIGSQVSEQNILQDFLRQKYEE 704
            |....::    :.||..|.|....|:.|.|
plant   663 EAARSKK----THVSYANALNWISRKGYSE 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 21/126 (17%)
MCM 128..648 CDD:214631 213/538 (40%)
PRLNP_001190655.1 MCM_N 16..98 CDD:405270 19/83 (23%)
MCM 139..638 CDD:214631 213/538 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266497at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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