DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm5 and MCM9

DIOPT Version :9

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001318221.1 Gene:MCM9 / 815890 AraportID:AT2G14050 Length:651 Species:Arabidopsis thaliana


Alignment Length:689 Identity:194/689 - (28%)
Similarity:318/689 - (46%) Gaps:112/689 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 EFIRTFNEENFFYK-YRDTLKRNYLNG----RYFLEIEMEDLVGFDETLADKLNKQPTEHLEIFE 95
            |.|.:..|  |..| |.|.|:...|:.    .|.|.||..:||..:.:||.::...|..:|..|:
plant     9 EHIESMTE--FLVKHYPDQLREISLSSDPKLHYPLFIEYAELVDDNPSLARQVFSDPEHYLRQFD 71

  Fly    96 EAAREVADEITAPRPEHEEHMHD--------IQILLSSNANPTNIRQLKSDCVSKL-VKIAGIIV 151
            ::| .:|.:|..   ||.:...:        |.:.::::.:|..........:.:: ||..||::
plant    72 DSA-ILAHKIAL---EHMKKFEEKIGIEKRFIHVRINTSGSPLERSPETFPSIGRVRVKHRGILM 132

  Fly   152 AASG--ISAKATRM-----SIQCLSCSTVIPNLKVNPGLEGYALPRKCNTEQAGRPKCPLDPFFI 209
            ...|  |.:.|.:|     ..:|..|..:.|.......:.....|..|.::::  ..|....|..
plant   133 MLKGTVIRSGAVKMYEGEKMYRCRKCKHMFPIFPELESINSIVKPPFCPSQRS--KACEGTNFDP 195

  Fly   210 MPDKCKCVDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCERVVPGNRVLIQGIYSIR------- 267
            :.|.....|:|.:|:||....:..|.|||.:.:.....|.:.|..|:.|::.||.:.:       
plant   196 VDDTVTRHDYQEIKIQENTQVLGVGVIPRSILVVLKDDLVDNVKAGDDVVVSGILTSKWSHDLKD 260

  Fly   268 --------KVGKPSRRDGREKAVVGVRAPYMRVVGITVDSEGAGAISRYSNITSDEEEHFRRMAA 324
                    .:....||....|:.:.:               ....|.::.|..|    |||....
plant   261 VRCDLEPMLIANHVRRTNELKSEIDI---------------SDDLIEKFKNFWS----HFRDTPL 306

  Fly   325 SGDIYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKRLPDGLCRRGDINVLLLGDPGTAKSQLLK 389
            .|  ...:.:.:.|.:||...:|.|:...|.||.:.....|...||:.::||:|||||.|||.||
plant   307 KG--RNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDASGTKVRGESHLLLIGDPGTGKSQFLK 369

  Fly   390 FVEKVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVA 454
            |..|::..||.|:|.||::||||.:.:||  ...:::|.||:||||||:.||||||.|||.||..
plant   370 FAAKLSNRAVITTGLGSTSAGLTVTAVKD--GGEWMLEAGALVLADGGLCCIDEFDSMREHDRAT 432

  Fly   455 IHEAMEQQTISIAKAGITTTLNSRCSVLAAANSIFGRWD-DTKGEENIDFMPTILSRFDMIFIVK 518
            ||||||||:||:||||:.|||:::..|..|.|. .|::| |.....|......:|||||::.::.
plant   433 IHEAMEQQSISVAKAGLVTTLSTKTIVFGATNP-KGQYDPDQSLSVNTALSGPLLSRFDIVLVLL 496

  Fly   519 DIHDESRDITLAKHII-NVHLSSNKSAPSEPAEGEIS-------LSTFKKYIHYCRTHCGPRLSE 575
            |..:...|..::.||: .|.:..::         |:.       |...::||.:.:.:..|.||:
plant   497 DTKNPEWDAVVSSHILAEVQIEQDR---------EVDDLTTIWPLPMLQRYIQFVKKNFRPVLSK 552

  Fly   576 AAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQLEAVIRISESLAKIRLQPFATDEHVNEAL 640
            .|.|.:.|.|.|.|        .|....:...|||.||::||::::.|::..:        ||..
plant   553 EAEEIISSYYRLQR--------RSSTHNAARTTVRMLESLIRLAQAHARLMFR--------NEVT 601

  Fly   641 RLFQVST---LDAAMT-----GSLAGA--EGFTTEEDQE 669
            ||..::.   ::::||     .|:..|  ..|:.|.|||
plant   602 RLDAITAILCIESSMTISAIVDSMGNALHSNFSEEPDQE 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 26/100 (26%)
MCM 128..648 CDD:214631 159/554 (29%)
MCM9NP_001318221.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266497at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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