DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm5 and mcm6

DIOPT Version :9

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001076318.1 Gene:mcm6 / 566409 ZFINID:ZDB-GENE-030909-6 Length:830 Species:Danio rerio


Alignment Length:818 Identity:251/818 - (30%)
Similarity:380/818 - (46%) Gaps:139/818 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GDNQQDAQI----NLQAVKKKYKEFIRTFNEENFFYKYRDTLKRNYLNGRYFLEIEMEDLVGFDE 77
            |.||...|:    ..:..:|.::.|:..|...:...||....:......|..|.:...||.||::
Zfish     7 GVNQNAGQVIKDELAEKCQKLFQAFLEEFQNSDGEVKYLRDAEELIRPERNTLAVSFTDLEGFNQ 71

  Fly    78 TLADKLNKQPTEHLEIFEEAAREVADEITAPRPEHEEHMHDIQILLSSNANPT--NIRQLKSDCV 140
            .||..:.:   |...::....|.|.:...    ||.|.....:..::....||  .||:|.:..|
Zfish    72 ELATAIQE---EFYRLYPYLCRAVRNFAR----EHGEVPTSKEFYVAFQDLPTRHKIRELTTVKV 129

  Fly   141 SKLVKIAGIIVAASGISAKATRMSIQCLSCSTVI-----------PNLKVNPGLEGYALPRKCNT 194
            ..||:|:|.:|....:..:....:..||.|..||           |::..||         .||.
Zfish   130 GSLVRISGQVVRTHPVHPELVSGTFLCLDCQGVIKDVEQQFKYTQPSICRNP---------VCNN 185

  Fly   195 EQAGRPKCPLDPFFIMPDKCKCVDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCERVVPGNR-- 257
            .:.         |.:..:|.|.:|||.|::||....:|:|.|||.:::.......|....|::  
Zfish   186 RRR---------FLLDTNKSKFIDFQKLRIQETQAELPRGSIPRSMEVILRAEAVESAQAGDKCD 241

  Fly   258 -----VLIQGIYSIRKVGKPSRRDGREKAV-------------VGVR-------------AP-YM 290
                 :::..|..:...|..:....|...|             :|||             || ..
Zfish   242 FIGSLIVVPDISQLATPGVRAETSSRTAGVQGYENEGLRGLKALGVRELSYKLAFLACHVAPTNP 306

  Fly   291 RVVGITVDSEGAGAISRYSNITSDEEEHFRRMAASGDIYERLSQSLAPSIFGSRDIKKAITCMLF 355
            |..|..:..|...|.|....::..|.|....|:...::|..|..||.|:|.|:.::|:.|..|||
Zfish   307 RFGGKEIRDEEQTAESIKKQMSVQEWEKVFEMSQDKNLYHNLCTSLFPTIHGNDEVKRGILLMLF 371

  Fly   356 GGSRKRLPDGLCRRGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQ 420
            ||..|...:|...||||||.::|||.|||||.||.||:..|.|||||||.||||||||:|::|.:
Zfish   372 GGVPKTTMEGTSLRGDINVCVVGDPSTAKSQFLKHVEEFCPRAVYTSGKASSAAGLTAAVVRDEE 436

  Fly   421 TRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAA 485
            :..||:|.||::|||.||.||||||||...|:||||||||||||||.|||:..|||:|.|:||||
Zfish   437 SHEFVIEAGALMLADNGVCCIDEFDKMETRDQVAIHEAMEQQTISITKAGVKATLNARTSILAAA 501

  Fly   486 NSIFGRWDDTKG-EENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHIINVHLSSNKSAPSEPA 549
            |.:.||:|.:|. ::|::....|:||||:.||:.|..:|..|..:|:.|:::|     |......
Zfish   502 NPVSGRYDRSKSLKQNVNLTAPIMSRFDLFFILVDDCNEVTDYAIARRIVDLH-----SRIENSV 561

  Fly   550 EGEISLSTFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQLEA 614
            :...||...::|:.:.| ...|::|:.:.|.:..:|..:|...|.....|..|    |||||||:
Zfish   562 DRVYSLDEIRRYLLFAR-QFKPKISKESEEFIVEQYKRLRQRDGSGVTKSAWR----ITVRQLES 621

  Fly   615 VIRISESLAKIRLQPFATDEHVNEALRLFQVSTL---------------------DAAMTGSLA- 657
            :||:|||:|::........:||.||.||...|.:                     |..|.|... 
Zfish   622 LIRLSESMARMHCCDEVQPKHVKEAFRLLNKSIIRVETPDVNLDQEEEEAMEEEEDNQMNGHDVP 686

  Fly   658 -GAEGFTTEE--DQETLNRI----------EKQLKRRFAIGSQVSEQNILQDFLR--QKYEERTV 707
             |..|....|  ..|..|.|          :..|:..||...::|  |:|...||  ::.|:...
Zfish   687 NGVNGAVNGEVNGHEHTNGINGHGVNGETAKPSLRLSFAEYKRIS--NLLVLHLRRAEEDEDEAA 749

  Fly   708 MK---VIHTMIR--RGELQHRMQ--------RKMLYRI 732
            :|   |::..::  ..|:...|:        .|::||:
Zfish   750 LKKSEVVNWYLKEIESEIDSEMELISKKTMIEKVIYRL 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 19/92 (21%)
MCM 128..648 CDD:214631 203/567 (36%)
mcm6NP_001076318.1 MCM_N 27..137 CDD:291233 27/116 (23%)
MCM 117..655 CDD:214631 202/565 (36%)
P-loop_NTPase <445..532 CDD:304359 53/86 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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