DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm5 and mcm6.2

DIOPT Version :10

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001016221.1 Gene:mcm6.2 / 548975 XenbaseID:XB-GENE-5870537 Length:821 Species:Xenopus tropicalis


Alignment Length:816 Identity:252/816 - (30%)
Similarity:390/816 - (47%) Gaps:139/816 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DDAGVFFSDNFGGDNQQDAQINLQAVKKKYKEFIRTFNEE-------NFFYKYRDTLKRNYLNGR 62
            |.||..|.|......|           |.:.||:    ||       |.:....:.|.|...|  
 Frog    13 DTAGQLFKDELSDKCQ-----------KLFLEFL----EECKGKDGSNLYVSAAEELVRPERN-- 60

  Fly    63 YFLEIEMEDLVGFDETLADKLNKQPTEHLEIFEEAAREVAD------EITAPRPEHEEHMHDIQI 121
             .|.:...|:..:::.||..:.:   |:..::....|.|..      .|.|.:        :..:
 Frog    61 -TLVVNFTDIEYYNQQLATTIQE---EYYRVYPHLCRAVRSFARQMGNIPANK--------EFYV 113

  Fly   122 LLSSNANPTNIRQLKSDCVSKLVKIAGIIVAASGISAKATRMSIQCLSCSTVIPNLKVNPGLEGY 186
            ..|.......||:|.|..:..|::|:|.:|....:..:....:..|:.|.:|:.:::..   ..|
 Frog   114 AFSDFPARQKIRELSSAKIGTLLRISGQVVRTHPVHPELVSGTFLCMDCQSVVKDVEQQ---FRY 175

  Fly   187 ALPRKC-NTEQAGRPKCPLDPFFIMPDKCKCVDFQTLKLQELPDFVPQGEIPRHLQLF------- 243
            ..|..| |...|.|.:..||     .:|.:.||||.:::||....:|:|.|||.:::.       
 Frog   176 TQPTICKNPVCANRRRFTLD-----TNKSRFVDFQKVRIQETQAELPRGAIPRSVEIILRAEAVE 235

  Fly   244 -------CDRSLCERVVPGNRVLIQGIYSIRKVGKPSRRDG-REKAVVGVRAPYMR--------- 291
                   ||.:....|||....|..|...:....|.:..:| ..:.|.|::|..:|         
 Frog   236 TAMAGDRCDFTGTLIVVPDISALAAGDARMETGAKVTGGEGFNSEGVQGLKALGVRDLSYRLAFL 300

  Fly   292 --VVGIT--------VDSEGAGAISRYSNITSDEEEHFRRMAASGDIYERLSQSLAPSIFGSRDI 346
              .||.|        :..|...|.|..:.:|..|.|....|:...::|..|..||.|:|.|:.:|
 Frog   301 ACHVGATNPRFGGKDLREEDQTAESIKNQMTVQEWEKVFEMSQDKNLYHNLCTSLFPTIHGNDEI 365

  Fly   347 KKAITCMLFGGSRKRLPDGLCRRGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGL 411
            |:.:..|||||..|...:|...||||||.::|||.|:|||.||.||:.:|.|||||||.||||||
 Frog   366 KRGVLLMLFGGVPKTTMEGTSLRGDINVCIVGDPSTSKSQFLKHVEEFSPRAVYTSGKASSAAGL 430

  Fly   412 TASVMKDPQTRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLN 476
            ||:|:||.::..||:|.||::|||.||.||||||||...|:||||||||||||||.|||:..|||
 Frog   431 TAAVVKDEESHEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISITKAGVKATLN 495

  Fly   477 SRCSVLAAANSIFGRWDDTKG-EENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHIINVHLSS 540
            :|.|:|||||.:.||::.:|. :.|::....|:||||:.||:.|..:|..|..:|:.|:::|..:
 Frog   496 ARTSILAAANPVGGRYERSKSLKHNVNLSAPIMSRFDLFFILVDECNEVTDYAIARRIVDLHARN 560

  Fly   541 NKSAPSEPAEGEISLSTFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSI 605
            .:|     .|...|:...::|:.:.| ...|::::.|.|.:..:|..:|    |::.:...:.|.
 Frog   561 EES-----IERVYSIEDIQRYLLFAR-QFQPKITKEAEEFIVEQYRRLR----QRDGSGVAKSSW 615

  Fly   606 PITVRQLEAVIRISESLAKIRLQPFATDEHVNEALRL-----FQVSTLDAAM------------- 652
            .|||||||::||:|||:|::........:||.||.||     .:|.|.|.:.             
 Frog   616 RITVRQLESLIRLSESMARMHCSDEVQPKHVKEAFRLLSKSIIRVDTPDVSFDQGEDEKNVEEEV 680

  Fly   653 -TGSL-AGAEGFTTEEDQETLN---RIEKQLKRRFAIGSQVSEQNILQDFLRQKYEE------RT 706
             ..:| .|.|...|.:| |.:|   .....||..||...|:|...:|.   .||.||      .|
 Frog   681 NNANLNNGEEAMETNQD-EPINDKPSTNAGLKMSFAEYKQISNLLVLH---MQKMEEVEEECHLT 741

  Fly   707 VMKVIHTMIRRGE----------LQHRMQRKMLYRI 732
            ...:::..::..|          |:.|:..|:::|:
 Frog   742 TTDLVNWYLKEMEAEIETETELILKKRLIEKVIHRL 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..125 CDD:464206 18/106 (17%)
MCM 128..648 CDD:214631 201/560 (36%)
mcm6.2NP_001016221.1 MCM_N 28..117 CDD:464206 19/117 (16%)
MCM 123..658 CDD:475121 200/552 (36%)
Arginine finger 529..532 2/2 (100%)
MCM6_C 710..819 CDD:465688 17/71 (24%)

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