DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm5 and mcm2

DIOPT Version :9

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001006772.1 Gene:mcm2 / 448458 XenbaseID:XB-GENE-999974 Length:884 Species:Xenopus tropicalis


Alignment Length:757 Identity:242/757 - (31%)
Similarity:381/757 - (50%) Gaps:119/757 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KYKEFIRTFNEEN----FFYKYRDTLKRNYLNGRYFLEIEMEDLVGFDETLADKLNKQPTEHLEI 93
            ::|.|:||..:|:    |..|..|..|.|    :..|.:..|||...:..||..|.:.|.|.|:|
 Frog   183 RFKNFLRTHVDEHGHNVFKEKISDMCKEN----KESLVVNYEDLAAREHVLAYFLPEAPAEMLKI 243

  Fly    94 FEEAAREVADEITAPRPEHEEHMHDIQILLSSNANPTNIRQLKSDCVSKLVKIAGIIVAASGISA 158
            |:|||:||   :....|:::....:|.:.:|.......:|.|:...:::|::.:|::...:|:..
 Frog   244 FDEAAKEV---VLVMYPKYDRIAREIHVRISHLPLVEELRSLRQLHLNQLIRTSGVVTCCTGVLP 305

  Fly   159 KATRMSIQCLSCSTVI------PNLKVNPGLEGYALPRKCNTEQAGRPKC-PLDPFFIMPDKCKC 216
            :.:.:...|..|:.::      .|.:|.||        .|       |:| .|.||.|..::...
 Frog   306 QLSMVKYNCNKCNFILGPFFQSQNQEVKPG--------SC-------PECQSLGPFEINMEETVY 355

  Fly   217 VDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCERVVPGNRVLIQGIYSIRKVGKPSRRDGREKA 281
            .::|.:.:||.|..|..|.:||.........|.:...||:.:.:.|.|.....|..:..:|....
 Frog   356 QNYQRITIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGTYHNNYDGSLNTANGFPVF 420

  Fly   282 VVGVRAPYMR------VVGITVDSEGAGAISRYSNITSDEEEHFRRMAASGDIYERLSQSLAPSI 340
            ...:.|.::.      .||...|.:....::    ::.||.           |.||:..|:||||
 Frog   421 ATVILANHITKKDDKVAVGELTDEDVKAIVA----LSKDER-----------IGERIFASIAPSI 470

  Fly   341 FGSRDIKKAITCMLFGGSRKRLPDGLCR-RGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGK 404
            :|..|||:.:...||||..|. |.|..: ||||||||.|||||||||.||:|||||..||:|:|:
 Frog   471 YGHEDIKRGLALALFGGEAKN-PGGKHKVRGDINVLLCGDPGTAKSQFLKYVEKVASRAVFTTGQ 534

  Fly   405 GSSAAGLTASVMKDPQTRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKA 469
            |:||.||||.|.:.|.|:.:.:|.||:||||.||..|||||||.:.||.:||||||||:|||:||
 Frog   535 GASAVGLTAYVQRHPVTKEWTLEAGALVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKA 599

  Fly   470 GITTTLNSRCSVLAAANSIFGRWDDT-KGEENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHI 533
            ||.|:|.:||:::||:|.|.||:|.: ...||:|....|:||||::.:|:|..|..:|..||:.:
 Frog   600 GIVTSLQARCTIIAASNPIGGRYDPSLTFSENVDLTEPIVSRFDILCVVRDTVDPVQDEMLARFV 664

  Fly   534 INVHLSSNKSAPSEPAEGE------------ISLSTFKKYIHYCRTHCGPRLSEAAGEKLKSRYV 586
            :..|:..:.|: .:.|.||            :.....||||.|.:....|:|::...:|:...|.
 Frog   665 VGSHIKHHPSS-KDIANGEEFALPNTFGVEPLPQEVLKKYIMYSKEKIHPKLNQMDQDKVAKMYS 728

  Fly   587 LMRSGAGQQEKASDKRLSIPITVRQLEAVIRISESLAKIRLQPFATDEHVNEALRLFQVSTLDA- 650
            .:|       |.|....|||||||.:|::||::|:.|::.|:.:..::.||.|:|:...|.:|. 
 Frog   729 DLR-------KESMATGSIPITVRHIESMIRMAEAHARMHLRDYVVEDDVNMAIRVMLESFIDTQ 786

  Fly   651 ------AMTGSLAGAEGFTTEEDQETLNRIEKQLKRRFAIGSQVSEQNILQDFLRQKY------- 702
                  :|..:.|....| ..::.|.|..:.|||         |:||...|   |.:|       
 Frog   787 KFSVMRSMRKTFARYLAF-RRDNNELLLFVLKQL---------VAEQTSYQ---RNRYGAQQDTI 838

  Fly   703 ---EERTVMKV----IHT--------MIRRGELQHRMQRKML 729
               |:..|.|.    ||.        :.:.....|.:::||:
 Frog   839 EVPEKDLVDKARQINIHNLSAFYDSDLFKMNRFTHDVKKKMI 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 29/94 (31%)
MCM 128..648 CDD:214631 189/546 (35%)
mcm2NP_001006772.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..61
MCM2_N 44..167 CDD:372227
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..151
MCM_N 184..272 CDD:379644 29/94 (31%)
MCM 276..783 CDD:214631 189/545 (35%)
Arginine finger 640..643 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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