DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm5 and Mcm6

DIOPT Version :10

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster


Alignment Length:678 Identity:223/678 - (32%)
Similarity:344/678 - (50%) Gaps:84/678 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DAQINLQAVK--------KKYKEFIRTFNEENFFYKYRDTLKRNYLNGRYFLEIEMEDLVGFDET 78
            |||:....||        |.:::|:..|.|:... ||...........|..||:..||:..:|:.
  Fly     5 DAQVGQLRVKDEVGIRAQKLFQDFLEEFKEDGEI-KYTRPAASLESPDRCTLEVSFEDVEKYDQN 68

  Fly    79 LADKLNKQPTEHLEIF----EEAAREVADEITAPRPEHEEHMHDIQILLSSNANPTNIRQLKSDC 139
            ||..:.:   |:..|:    :..:..|.|.|..      :...|..:..:.......:|.|.:..
  Fly    69 LATAIIE---EYYHIYPFLCQSVSNYVKDRIGL------KTQKDCYVAFTEVPTRHKVRDLTTSK 124

  Fly   140 VSKLVKIAGIIVAASGISAKATRMSIQCLSCSTVIPNLK-----VNPGLEGYALPRKCNTEQAGR 199
            :..|::|:|.:|....:..:.......||.|.|.|.|::     .||.:        |.     .
  Fly   125 IGTLIRISGQVVRTHPVHPELVSGVFMCLDCQTEIRNVEQQFKFTNPTI--------CR-----N 176

  Fly   200 PKCPLDPFFIMP-DKCKCVDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCERVVPGNR------ 257
            |.|.....|::. :|...:|||.:::||....:|:|.|||.:::.....|.|.|..|:|      
  Fly   177 PVCSNRKRFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGT 241

  Fly   258 -VLIQGIYSIRKVGKPSRRDGREK------AVVGVRAPYMR-------VVGITVDSEGA---GAI 305
             :::..:..:..||..:....|.|      .|.|::|..||       .:..:|.:..|   |..
  Fly   242 LIVVPDVSVLAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFGGTD 306

  Fly   306 SRYSNIT--------SDEEEH-FRRMAASGDIYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKR 361
            ...|.:|        :|.|.| ...|:...::|:.|..||.|||:|:.::|:.|....|||..|.
  Fly   307 LPMSEVTAEDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKT 371

  Fly   362 LPDGLCRRGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFVM 426
            ..:....||||||.::|||.|||||.||.|...:|.|:|||||.||||||||:|::|.::.:||:
  Fly   372 TTEKTSLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVI 436

  Fly   427 EGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSIFGR 491
            |.||::|||.|:.||||||||.:.|:|||||||||||||||:||:..|||:|.|:|||||.|.||
  Fly   437 EAGALMLADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGR 501

  Fly   492 WDDTKG-EENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHIINVHLSSNKSAPSEPAEGEISL 555
            :|.:|. ::||.....|:||||:.||:.|..:|..|..:|:.|:::|.:..:|........|:  
  Fly   502 YDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNIEESVERAYTREEV-- 564

  Fly   556 STFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQLEAVIRISE 620
               .:|:.:.| ...|.:|:.||..|...|..:|    |::..:..|.:..|||||||::||:||
  Fly   565 ---LRYVTFAR-QFKPVISQEAGHMLVENYGHLR----QRDTGTSGRSTWRITVRQLESMIRLSE 621

  Fly   621 SLAKIRLQPFATDEHVNEALRLFQVSTL 648
            ::||:.......:.||.||.||...|.:
  Fly   622 AMAKLECSNRVLERHVKEAFRLLNKSII 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..125 CDD:464206 21/105 (20%)
MCM 128..648 CDD:214631 198/558 (35%)
Mcm6NP_511065.1 MCM_N 22..109 CDD:464206 20/96 (21%)
MCM 113..649 CDD:475121 198/558 (35%)
MCM6_C 702..816 CDD:465688
Blue background indicates that the domain is not in the aligned region.

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