DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm5 and Mcm3

DIOPT Version :9

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster


Alignment Length:811 Identity:247/811 - (30%)
Similarity:375/811 - (46%) Gaps:158/811 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LQAVKKKYKEFIRTFNEENFFYKY-RDTL----KRNYLNGRYFLEIEMEDLVGFDETLADKLNKQ 86
            ::.::::|.:|:....::..:..: :|.:    ||..:|                  :.|...|.
  Fly     9 IKDIQREYVDFLDDEEDQGIYAGHVKDMIAEKSKRLIVN------------------VNDLKRKN 55

  Fly    87 PTEHLEIFEEAA-------REVADEITAPRPEHEEHMHDIQILLS---SNANPTNIRQLKSDCVS 141
            |...|.:...||       |.:.:..:...|.:.:...|:.:...   .|.:.|. |.|.|..:.
  Fly    56 PQRALGLLSNAADEQLAFGRALKEYASTVDPGYAKMHEDLFVGFEGCFGNRHVTP-RSLTSIYLG 119

  Fly   142 KLVKIAGIIVAASGISAKATRMSIQCLSCSTV-------IPNLKVNPGLEGYALPRKCNTEQAGR 199
            .:|.:.||:...|.|..|..|....|.:...|       :.:.:..|  .|.|.|.|........
  Fly   120 NMVCVEGIVTKVSLIRPKVVRSVHYCPNTRKVMERKYTDLTSFEAVP--SGAAYPTKDEDGNLLE 182

  Fly   200 PKCPLDPFFIMPDKCKCVDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCERVVPGNRVLIQGIY 264
            .:..|..:         .|.|||.:||:|:..|.|::||.:.:.||..|.:|..||:||.|.|.|
  Fly   183 TEYGLSVY---------KDHQTLTIQEMPEKAPAGQLPRSVDIVCDDDLVDRCKPGDRVQIVGSY 238

  Fly   265 SIRKVGKPSRRDGREKAVVGVRAPYMRVVGITVDSEGAGAISRYSNITSDEEEHF--RRMAASGD 327
            ..    .|.:|.|.....       .|.|.:   :.....:|:.||:....|:..  :::|.:.|
  Fly   239 RC----LPGKRGGYTSGT-------FRTVLL---ANNISLLSKESNLDISREDIMLCKKLAKNND 289

  Fly   328 IYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKRLPDGLCRRGDINVLLLGDPGTAKSQLLKFVE 392
            |:|.||:||||||.|...:|:||.|:|.||..|.||:|...||||||||:|||..||||||::|.
  Fly   290 IFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKILPNGTRLRGDINVLLIGDPSVAKSQLLRYVL 354

  Fly   393 KVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHE 457
            ..||.|:.|:|:|||..||||:|..|.:|....:|.|||||||.|||||||||||.:.||.||||
  Fly   355 NTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHE 419

  Fly   458 AMEQQTISIAKAGITTTLNSRCSVLAAANSIFGRWDDTKGE-ENIDFMPTILSRFDMIFIVKDIH 521
            .|||..::|:||||..:||:|||||||||.::||:|..|.. |||....::|||||::|::.|:.
  Fly   420 VMEQGRVTISKAGIHASLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVI 484

  Fly   522 DESRDITLAKHIINVHLSSN-KSAPSEPA------------------------------------ 549
            |...|..::.|::.:|...| |.|..||.                                    
  Fly   485 DSDVDQMISDHVVRMHRYRNPKEADGEPLSMGSSYADSLSFVSSSEEKKDTEVYEKYDALLHGKS 549

  Fly   550 ----EGEISLSTFKKYIHYCRTHC-GPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITV 609
                |..:|:...:||||..:  | .|:|.|.|.|.:.:.|..:||   |:...:|...:.|||.
  Fly   550 RQRHEKILSVEFMRKYIHIAK--CMKPKLGEQACEAIANEYSRLRS---QEAVETDVARTQPITA 609

  Fly   610 RQLEAVIRISESLAKIRLQPFATDEHVNEALRLFQVS----TLDAAMTGSLAGAEGFTTEED--- 667
            |.||.:||:|.:.|:.|:....|.:..:.|:.|.|.:    .||...........|...|:|   
  Fly   610 RTLETLIRLSTAHARARMSKSVTIDDAHAAIELVQFAYFKKVLDKDRPSKRRRNSGSDAEDDNGE 674

  Fly   668 ---QETLNRIEKQLKRRFAIGSQVSEQNI------LQDFLRQK------------------YEER 705
               |.:.:|..|: .|...:|:...|::|      ..|..|::                  .||:
  Fly   675 ASSQRSPSRRSKR-TRTATVGADSDEEDIEPPQPDAGDLTRRETRRSLPARSVAMLMASPSSEEQ 738

  Fly   706 TVM-----KVIHTMIRRGELQHRMQRKMLYR 731
            :|.     ..|.:..|.||.::.:||  |:|
  Fly   739 SVATSTTEPAIISDARLGEFKNNLQR--LFR 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 15/104 (14%)
MCM 128..648 CDD:214631 206/575 (36%)
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 14/100 (14%)
MCM 106..648 CDD:214631 206/572 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469742
Domainoid 1 1.000 52 1.000 Domainoid score I661
eggNOG 1 0.900 - - E1_COG1241
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D15169at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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