DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm5 and Mcm7

DIOPT Version :9

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001004203.3 Gene:Mcm7 / 288532 RGDID:1303018 Length:719 Species:Rattus norvegicus


Alignment Length:754 Identity:236/754 - (31%)
Similarity:380/754 - (50%) Gaps:128/754 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KKKYKEFIRTFNEENFF----YKYRDTLKRNYLNGRYFLEIEMEDLVGFDETLADKLNKQPTEHL 91
            |:|.|:|::.|..::..    :||...|.......:..|.::::|:...|..|.|.:.:....:.
  Rat    10 KEKVKKFLQEFYYDDELGKKQFKYGTQLVHLAHREQVALYVDLDDVAEDDPELVDSICENAKRYS 74

  Fly    92 EIFEEAAREVADE-------------------------------ITAPRPEH-EEHMHDIQILLS 124
            .:|.:..:|:..|                               :..|:.:: .|.|...::...
  Rat    75 RLFADVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFQ 139

  Fly   125 --SNANPTNIRQLKSDCVSKLVKIAGIIVAASGISAKATRMSIQCLSCSTVIPNLKVNPGLEGYA 187
              |::.|..||::::|.|.||:.:.||:...|.:..:....:..|..|           |.|.|.
  Rat   140 GPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQC-----------GAETYQ 193

  Fly   188 -------LP------RKCNTEQAGRPKCPLDPFFIMPDKCKCVDFQTLKLQELPDFVPQGEIPRH 239
                   :|      ::|.|.::|      ...::.....|.:.||.:|:||..|.||.|.|||.
  Rat   194 PIQSPTFMPLIMCPSQECQTNRSG------GRLYLQTRGSKFIKFQEMKIQEHSDQVPVGNIPRS 252

  Fly   240 LQLFCDRSLCERVVPGNRVLIQGIYSIRKVGKPSRRDGREKAVVGVRA-PYM---RVVGITV--- 297
            :.:..:........||:.|.:.||:      .|..|.|.::...|:.: .|:   |||.:|.   
  Rat   253 ITVVLEGENTRIAQPGDHVSVTGIF------LPVLRTGFQQMAQGLLSETYLEAHRVVKMTKSED 311

  Fly   298 DSEGAGAISRYSNITSDEEEHFRRMAASGDIYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKRL 362
            |..|||.:|         .|..:::|.. |.||:|:.|:||.|:|..|:|||:..:|.||. .:.
  Rat   312 DVSGAGELS---------AEELKQIAEE-DFYEKLAASIAPEIYGHEDVKKALLLLLVGGV-DQS 365

  Fly   363 PDGLCRRGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFVME 427
            |.|:..||:|::.|:||||.||||||.:::::||.:.||:|:|||..||||:|::|..:....:|
  Rat   366 PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLE 430

  Fly   428 GGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSIFGRW 492
            |||:||||.||.||||||||.|.||.||||.|||||||||||||.||||:|||:|||||..:||:
  Rat   431 GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRY 495

  Fly   493 DDTKG-EENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHIINVHLSSNKSAPSEPAEGE-ISL 555
            :..:. |:||.....:|||||::::::|..|...|:.||:||..||..|.:    .||:.| :.:
  Rat   496 NPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQ----PPAQFEPLDM 556

  Fly   556 STFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQLEAVIRISE 620
            ...::||..||.. .|.:.::..:.:.:.||.||..|...:.|:      ..:.|.|.|::|:|.
  Rat   557 KLMRRYIAMCRER-QPTVPDSLADYITAAYVEMRREARASKDAT------YTSARTLLAILRLST 614

  Fly   621 SLAKIRLQPFATDEHVNEALRLFQVSTLDAAMTGSLAGAEGFT--TEEDQETLNRIEKQL----- 678
            :||::|:......|.||||:||.::|      ..||.|.:|.|  |:...:.:....::|     
  Rat   615 ALARLRMVDIVEKEDVNEAIRLMEMS------KDSLLGEKGQTARTQRPADVIFATVRELVSGGR 673

  Fly   679 KRRFAIGSQVSEQNILQDF-------LRQKYEERTVMKV 710
            ..||   |:..::.|.:.|       ...:|||..|.:|
  Rat   674 SVRF---SEAEQRCISRGFTPAQFQAALDEYEELNVWQV 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 19/128 (15%)
MCM 128..648 CDD:214631 199/541 (37%)
Mcm7NP_001004203.3 MCM_N 12..165 CDD:291233 26/152 (17%)
MCM 145..641 CDD:214631 199/546 (36%)
P-loop_NTPase 376..515 CDD:304359 82/138 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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