DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm5 and mcm5

DIOPT Version :9

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001342928.1 Gene:mcm5 / 2542477 PomBaseID:SPAC1B2.05 Length:720 Species:Schizosaccharomyces pombe


Alignment Length:736 Identity:346/736 - (47%)
Similarity:479/736 - (65%) Gaps:31/736 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GFDDAGVFFSDNFGGDNQQDAQINLQAVKKKYKEFIRTFNEENFFYKYRDTLKRNYLNGRYFLEI 67
            |::.:.|:::....|:.:.|:.::.:   |.:.:||..|..:|.|. ||..|:.|.:..:|.|.|
pombe     6 GWERSAVYYTPVLPGEQELDSNVSHE---KNFIQFIEEFVIDNDFI-YRTQLRDNLVVKQYMLNI 66

  Fly    68 EMEDLVGFDETLADKLNKQPTEHLEIFEEAAREVADEITAPRPEH-EEHMHDIQILLSSNANPTN 131
            ::..|:.::|.||..|..|||:.|.:||.|...||..:.....|: ..::...|:.|..:||...
pombe    67 DLRHLISYNEDLAHLLLSQPTDILPLFESAVTTVAKRLLYRSQENASTNIPTCQVTLRYDANILP 131

  Fly   132 IRQLKSDCVSKLVKIAGIIVAASGISAKATRMSIQCLSC-STVIPNLKVNPGLEGYALPRKCNTE 195
            ||.|.:..:||||::.|||:.||.:|.:||.:.:.|.:| :|.|  |:::.|..|..|||.|...
pombe   132 IRNLTASHISKLVRVPGIIIGASTLSCRATALHLVCRNCRATRI--LQISGGFSGVQLPRVCEAP 194

  Fly   196 --QAGRPKCPLDPFFIMPDKCKCVDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCERVVPGNRV 258
              ...:..||:|||.|...|...:|.|.|||||.||.||.||:|||:.|..||.|..::.||.|.
pombe   195 VLDGEKKDCPMDPFIIDHSKSTFIDQQVLKLQEAPDMVPVGELPRHILLNADRYLTNQITPGTRC 259

  Fly   259 LIQGIYSIRKVGKPSRRDGREKAVVGVRAPYMRVVGITVDS-EGAGAISRYSNITSDEEEHFRRM 322
            :|.||:||.:     .:..:....|.:|.||:|||||.:|| :|:.:...:|   .:|||.|..:
pombe   260 VITGIFSIFQ-----NKSVKASGAVAIRNPYIRVVGIQMDSNDGSKSTPLFS---EEEEEEFLEI 316

  Fly   323 AASGDIYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKRLPDGLCRRGDINVLLLGDPGTAKSQL 387
            :.:.::|:.:|.|::|:|:|:.||||||.|:||.||:|.||||:..||||||||||||||||||.
pombe   317 SRTPNLYDIISNSISPAIYGNVDIKKAIACLLFSGSKKILPDGMRLRGDINVLLLGDPGTAKSQF 381

  Fly   388 LKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFVMEGGAMVLADGGVVCIDEFDKMREDDR 452
            |||||::||||||||||||||||||||:.:|..||.|.:|||||||||||:||||||||||::||
pombe   382 LKFVERLAPIAVYTSGKGSSAAGLTASIQRDSVTREFYLEGGAMVLADGGIVCIDEFDKMRDEDR 446

  Fly   453 VAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSIFGRWDDTKGE-ENIDFMPTILSRFDMIFI 516
            |||||||||||||||||||||.||||.|||||||.||||:||.|.. |||||..|||||||||||
pombe   447 VAIHEAMEQQTISIAKAGITTILNSRTSVLAAANPIFGRYDDMKTPGENIDFQSTILSRFDMIFI 511

  Fly   517 VKDIHDESRDITLAKHIINVHLSSNKSAPSEPAEGEISLSTFKKYIHYCRTHCGPRLSEAAGEKL 581
            |||.|||::|..:|:|:||:|.:..:|:.: .|.|||....|::||:|||..|.|.|...|.|||
pombe   512 VKDEHDETKDRNIARHVINLHTNLQESSET-LAIGEIPFDKFRRYINYCRHKCAPNLDAEAAEKL 575

  Fly   582 KSRYVLMRSGAGQQEKASDKRLSIPITVRQLEAVIRISESLAKIRLQPFATDEHVNEALRLFQVS 646
            .|::|.:|....|.|:.|:.|.:||||||||||:|||:|||||:.|.|.|::.|..||:|||..|
pombe   576 SSQFVAIRKRVHQSEQDSNSRSTIPITVRQLEAIIRITESLAKMSLSPIASEAHATEAIRLFLTS 640

  Fly   647 TLDAAMTGSLAGAEGFTTEEDQETLNRIEKQLKRRFAIGSQVSEQNILQDFLR-QKYEERTVMKV 710
            ||.||...|         .|..|.:.:||..|::|..||.|.|.:.::::::. ..|.:..:...
pombe   641 TLAAATQSS---------PEVTEEVKKIEASLRKRLPIGFQASYRMLIREYVNGHGYSQHALEMA 696

  Fly   711 IHTMIRRGELQHRMQRKMLYR 731
            :..:..:..:|.|...:.:||
pombe   697 LQILSSKETIQLRNGGQTVYR 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 29/93 (31%)
MCM 128..648 CDD:214631 291/524 (56%)
mcm5NP_001342928.1 MCM_N 34..124 CDD:317013 28/90 (31%)
MCM 128..642 CDD:214631 291/524 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 324 1.000 Domainoid score I221
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4904
Inparanoid 1 1.050 607 1.000 Inparanoid score I158
OMA 1 1.010 - - QHG53983
OrthoFinder 1 1.000 - - FOG0004690
OrthoInspector 1 1.000 - - oto100578
orthoMCL 1 0.900 - - OOG6_102165
Panther 1 1.100 - - LDO PTHR11630
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R695
SonicParanoid 1 1.000 - - X3292
TreeFam 1 0.960 - -
1413.860

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