DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm5 and mcm2

DIOPT Version :9

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_775364.2 Gene:mcm2 / 192338 ZFINID:ZDB-GENE-020419-24 Length:889 Species:Danio rerio


Alignment Length:795 Identity:251/795 - (31%)
Similarity:400/795 - (50%) Gaps:123/795 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEGFDDAGVFFSDNFGGDNQQDAQ-------INLQA----VKKKYKEFIRTFNEEN----FFYKY 50
            |||.|:..:...:|.     :|.:       :::.|    :..::|.|:||..:|:    |..:.
Zfish   148 MEGEDEEMIESIENL-----EDMKGHTVREWVSMAAPRLEIYHRFKNFLRTHVDEHGHNVFKERI 207

  Fly    51 RDTLKRNYLNGRYFLEIEMEDLVGFDETLADKLNKQPTEHLEIFEEAAREVADEITAPRPEHEEH 115
            .|..|.|    :..|.:..|:|...:..||..|.:.|.|.|:||:|||:||   :.|..|:::..
Zfish   208 SDMCKEN----KESLLVNYEELASREHVLAYFLPEAPAEMLKIFDEAAKEV---VLAMYPKYDRI 265

  Fly   116 MHDIQILLSSNANPTNIRQLKSDCVSKLVKIAGIIVAASGISAKATRMSIQCLSCSTVI------ 174
            .|:|.:.:.:......:|.|:...:::|::.:|::.:.:|:..:...:...|..|:.::      
Zfish   266 AHEIHVRIGNLPLVEELRSLRQLHLNQLIRTSGVVTSCTGVLPQLGMVKYNCNKCNFILGPFFQS 330

  Fly   175 PNLKVNPGLEGYALPRKCNTEQAGRPKC-PLDPFFIMPDKCKCVDFQTLKLQELPDFVPQGEIPR 238
            .|.:|.||        .|       |:| .|.||.|..::....::|.:.:||.|..|..|.:||
Zfish   331 QNQEVKPG--------SC-------PECQSLGPFEINMEQTVYQNYQRITIQESPGKVAAGRLPR 380

  Fly   239 HLQLFCDRSLCERVVPGNRVLIQGIYSIRKVGKPSRRDGREKAVVGVRAPYMRVVGITVDSEGAG 303
            .........|.:...||:.:.:.|||.....|..:..:|     ..|.|..:....|....||..
Zfish   381 SKDAILLADLVDMCKPGDEIELTGIYHNNYDGSLNMANG-----FPVFATVILANHIARKDEGVA 440

  Fly   304 AISRYSNITSDEEEHFRRMAASGDIYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKRLPDGLCR 368
            .    :.:|.::.:....::....|.||:..|:.|||:...|||:.:...||||..|. |.|..:
Zfish   441 V----AELTDEDVKAIVALSKDERIGERIFASIGPSIYAHEDIKRGLALALFGGEAKN-PGGKHK 500

  Fly   369 -RGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFVMEGGAMV 432
             ||||||||.|||||||||.||:|||||..||:|:|:|:||.||||.|.:.|.:|.:.:|.||:|
Zfish   501 VRGDINVLLCGDPGTAKSQFLKYVEKVASRAVFTTGQGASAVGLTAYVQRHPVSREWTLEAGALV 565

  Fly   433 LADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSIFGRWDDT-K 496
            |||.||..|||||||.:.||.:||||||||:|||:||||.|:|.:||:|:||||.|.||:|.: .
Zfish   566 LADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLT 630

  Fly   497 GEENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHIINVHLS---SNKSAPSEPAEGEISLSTF 558
            ..||:|....|:||||::.:|:|..|..:|..||:.::..|:.   |||.......|..:..:||
Zfish   631 FSENVDLTEPIISRFDVLCVVRDTVDPVQDEMLARFVVGSHIKHHPSNKEGGVAGLEEVVLPNTF 695

  Fly   559 ----------KKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQLE 613
                      :|||.|.:....|:|::...:|:...|..:|       |.|....|||||||.:|
Zfish   696 DVPPIPQELLRKYIIYAKERVRPKLNQMDQDKVARIYSDLR-------KESMATGSIPITVRHIE 753

  Fly   614 AVIRISESLAKIRLQPFATDEHVNEALRLFQVSTLDA-------AMTGSLAGAEGFTTEEDQETL 671
            ::||::|:.|::.|:.:..::.||.|:|:...|.:|.       :|..:.|....| ..::.|.|
Zfish   754 SMIRMAEAHARMHLRDYVLEDDVNMAIRVMLESFIDTQKFSVMRSMRKTFARYLAF-RRDNNELL 817

  Fly   672 NRIEKQLKRRFAIGSQVSEQNILQDFLRQKY----------EERTVMKV----IHT--------M 714
            ..|.|||     :..|||.|       |.:|          |:..|.|.    ||:        :
Zfish   818 LFILKQL-----VSEQVSYQ-------RNRYGAQQDTIEIAEKDLVDKARQINIHSLSAFYDSDL 870

  Fly   715 IRRGELQHRMQRKML 729
            .|..:..|.:::|::
Zfish   871 FRSNKFSHDVKKKLI 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 29/96 (30%)
MCM 128..648 CDD:214631 191/541 (35%)
mcm2NP_775364.2 MCM2_N 57..170 CDD:289392 6/26 (23%)
MCM_N 186..298 CDD:291233 32/118 (27%)
MCM 279..788 CDD:214631 191/540 (35%)
P-loop_NTPase 506..645 CDD:304359 85/138 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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