DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm5 and mcm3

DIOPT Version :9

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_997732.2 Gene:mcm3 / 192323 ZFINID:ZDB-GENE-020419-4 Length:807 Species:Danio rerio


Alignment Length:743 Identity:229/743 - (30%)
Similarity:353/743 - (47%) Gaps:104/743 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DNQQDAQINLQAVKKKYKEFIRTFNEENFFY-KYRDTLKRNYLNGRYFLEIEMEDLVGFDETLAD 81
            |:|:     ::..::.|.:|:....::..:. |.|..:..|    :..|.:.:.||...:|..|.
Zfish     7 DDQE-----MREAQRDYLDFLDDDQDQGIYQSKVRQMISEN----KSRLIVNLNDLRRRNEKRAA 62

  Fly    82 KLNKQPTEHLEIFEEAAREVADEITAPRPEHEEHMHDIQILLSSNANPTNIRQLKSDCVSKLVKI 146
            ||.....|.|..|:.|.:::...|.|...:..|... |.:..|..:...:.|.|.|..:..:|.:
Zfish    63 KLLNNAFEELLAFQRALKDLVASIDATYAKQCEEFF-IGLEGSFGSKHVSPRTLTSRLLGSMVCL 126

  Fly   147 AGIIVAASGISAKATRMSIQCLSCS-------TVIPNLKVNPGLEGYALPRKCNTEQAGRPKCPL 204
            .||:...|.:..|..|....|.:..       |.:.:|...|....|....:.|.        ||
Zfish   127 EGIVTKCSLVRPKVVRSVHYCPATKKTMERKYTDLTSLDAFPSSAIYPTKDEENN--------PL 183

  Fly   205 DPFFIMPDKCKCVDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCERVVPGNRVLIQGIYSIRKV 269
            :..|.:   ....|.||:.:||:|:..|.|::||.:.:..|..|.:.|.||:|..:.|.|..   
Zfish   184 ETEFGL---SVYKDHQTITIQEMPEKAPAGQLPRSVDIILDNDLVDAVKPGDRTQVIGTYRC--- 242

  Fly   270 GKPSRRDGREKAVVGVRAPYMRVVGITVD-SEGAGAISRYSNITSDEEEHFRRM--AASGDIYER 331
             .|.::.|.....       .|.:.|... .:.:..||.|  .::|:....:..  :.|.:::::
Zfish   243 -LPGKKGGFTSGT-------FRTIMIACHVKQMSKEISHY--FSADDVAKIKSFCRSRSKNVFDQ 297

  Fly   332 LSQSLAPSIFGSRDIKKAITCMLFGGSRKRLPDGLCRRGDINVLLLGDPGTAKSQLLKFVEKVAP 396
            |::||||||.|...|||||.|||.||..|.|.:|...||||||||:|||..||||||::|...||
Zfish   298 LARSLAPSIHGHEYIKKAILCMLLGGVEKVLENGSRIRGDINVLLIGDPSVAKSQLLRYVLHTAP 362

  Fly   397 IAVYTSGKGSSAAGLTASVMKDPQTRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQ 461
            .|:.|:|:|||..||||:|..|.:|....:|.|||||.|.|||||||||||.:.||.||||.|||
Zfish   363 RAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLGDRGVVCIDEFDKMSDMDRTAIHEVMEQ 427

  Fly   462 QTISIAKAGITTTLNSRCSVLAAANSIFGRWDDTKGE-ENIDFMPTILSRFDMIFIVKDIHDESR 525
            ..::||||||...||:|||||||||.::||:|..|.. |||....::|||||::||:.|..|..:
Zfish   428 GRVTIAKAGIHARLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFIMLDQMDPEQ 492

  Fly   526 DITLAKHIINVH---------------------LSSNKSAPSEPAEGE----------------- 552
            |..::.|::.:|                     |::.....::..|.|                 
Zfish   493 DREISDHVLRMHRYRDPHEQDGTALALGGTIDALATEDPDATQEEEEELQVYEKHNPLLHGSKKN 557

  Fly   553 ----ISLSTFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQLE 613
                :|.:..:||||..:. ..|.|::.|...:...|..:|:   |::..||...:.|:|.|.||
Zfish   558 KDRVVSKAFMRKYIHVAKA-ISPVLTQDAANHIAEEYSRLRN---QEQLGSDIARTSPVTARTLE 618

  Fly   614 AVIRISESLAKIRLQPFATDEHVNEALRLFQVS----TLDAAMTGSLAGAEGFTTEEDQETLNRI 674
            .:||:|.:.||.|:...........|:.|.|.:    .|:.....|..|.:...:|:::|..:..
Zfish   619 TLIRLSTAHAKARMSKAVELVDTEVAVELVQFAYFKKVLEKERKRSRNGQQDAASEDEEEEEDEA 683

  Fly   675 E-----KQLKRRFAIGSQVSEQNILQDF 697
            :     .:.:||   |||.||.....||
Zfish   684 QDTPRPPRKRRR---GSQGSESYDPYDF 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 20/93 (22%)
MCM 128..648 CDD:214631 192/576 (33%)
mcm3NP_997732.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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