DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm5 and mcm-6

DIOPT Version :10

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001023011.1 Gene:mcm-6 / 176385 WormBaseID:WBGene00003158 Length:810 Species:Caenorhabditis elegans


Alignment Length:810 Identity:250/810 - (30%)
Similarity:389/810 - (48%) Gaps:138/810 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DN-FGGDNQQDAQINLQAVKKKYKEFIRTFNEENFFYKYRDTLKRNYLNGRYFLEIEMEDLVGFD 76
            || .||..||....:...|:.::.:|:::|.::...:.|:..:|......:..:.|.|:.|..|.
 Worm     2 DNIIGGQAQQVEDTDGTRVQNEFSKFLKSFKDQKNEFIYKSAMKELVQPEKNTIFINMQHLYKFS 66

  Fly    77 ETLADKLNKQ-------PTEHLEIFEEAAREVADEITAPRPEHEEHMHDIQILLS-SNAN-PTNI 132
            ..||..:..|       ..|.|.:   |..:..||      ...:.|...|:.:| .|.: .|.:
 Worm    67 NNLATTIELQYYRVYPFMCEALHL---ATLDACDE------SERQQMFKKQLYVSLFNLDAKTKV 122

  Fly   133 RQLKSDCVSKLVKIAGIIVAASGISAKATRMSIQCLSCSTVIPNLKVNPGLEGYALPRKC-NTEQ 196
            |:|.:|.|..||:|||.||....:..:.:|....|..|.....:::..   ..|..|.|| |.:.
 Worm   123 RELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDVQQQ---FRYTQPTKCANPQC 184

  Fly   197 AGRPKCPLDPFFIMPDKCKCVDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCERVVPGNRVLIQ 261
            ..|.:..||     .:....||||.:::||....:|:|.|||.:.:.....:.|.|.||::..|.
 Worm   185 MNRTRFSLD-----VNSSTFVDFQKIRIQETQAELPRGSIPRTVDVIVRGEMVETVQPGDKCDIV 244

  Fly   262 G----IYSIRKVGKPSRR-----DGREKA-----------VVGVR---------APYMRVVGITV 297
            |    |..|.::..|..|     ..|.:|           .:|||         |.:::.....|
 Worm   245 GTLIVIPDIAQLSTPGLRAETSNQNRGRATDKSEGITGLKALGVRDLTYKMAFLACHIQQTESLV 309

  Fly   298 DSEGAGAISR------YSNITSDEEEHFRRMAASGDIYERLSQSLAPSIFGSRDIKKAITCMLFG 356
            ..:.:||:..      :|.:::::....::|:....|.:.:..||.|:|:|:.::|..:..||.|
 Worm   310 GGDASGAVEETDYLDLWSKMSTEDRATLKKMSDDKKIEKNIVDSLFPNIYGNHEVKLGVLLMLLG 374

  Fly   357 G-SRKRLPDGLCRRGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQ 420
            | ::|...:|...||||||.|:|||.|||||:||.||:.:|.|:|||||.||||||||:|:||.:
 Worm   375 GVAKKSRDEGTSLRGDINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASSAAGLTAAVVKDEE 439

  Fly   421 TRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAA 485
            :..||:|.||::|||.||.||||||||...|:||||||||||||||.|||:..|||:|.|:||||
 Worm   440 SFEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISITKAGVKATLNARASILAAA 504

  Fly   486 NSIFGRWDDTKG-EENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHIINVHLSSNKSAPSEPA 549
            |.:.||:|.::. :.|:.....|:||||:.|::.|..:|..|..:|:.|::     |..|.||..
 Worm   505 NPVNGRYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECNEVTDYAIARRILD-----NHRAISEHT 564

  Fly   550 EGE--ISLSTFKKYIHYCRTHC-GPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQ 611
            |.:  ..:...||||.:.|  | .|::|:.|.|.|...|..:|.........|..|    |||||
 Worm   565 ERDSVYKIDDIKKYIAFAR--CFKPKISDKAAETLVREYKKLRMSDSNNAATSSWR----ITVRQ 623

  Fly   612 LEAVIRISESLAKIRLQPFATDEHVNEALRLFQVSTL-----DAAMTG---------------SL 656
            ||:::|:||:||::........|||.:|..|...|.:     |.|:..               :.
 Worm   624 LESLVRLSEALARLHCGKEVLVEHVEKAAELLNKSIVRVEQPDIALDDDDFDNNIMVVEADKENQ 688

  Fly   657 AGAEGFTTEEDQETLNRIE-KQLKRRFAIGSQVSEQNIL-------------------------- 694
            .|.:....:.::|...:|: .:||..|....|:|:..:|                          
 Worm   689 RGDDSMDHDGEKENAPKIDIAKLKISFKEYKQLSDVLVLHMRSDEDNQGEDEYDGVKQSALVEWY 753

  Fly   695 -----------QDFLRQK-YEERTVMKVIH 712
                       :||..|| ..||.:.::||
 Worm   754 LSTIEADLETEEDFNVQKTICERVIHRLIH 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..125 CDD:464206 19/101 (19%)
MCM 128..648 CDD:214631 204/561 (36%)
mcm-6NP_001023011.1 MCM_N 21..115 CDD:464206 19/102 (19%)
MCM 119..660 CDD:214631 204/559 (36%)
MCM6_C 710..807 CDD:465688 14/74 (19%)

Return to query results.
Submit another query.