DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm5 and mcm-2

DIOPT Version :10

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001022416.1 Gene:mcm-2 / 174841 WormBaseID:WBGene00003154 Length:881 Species:Caenorhabditis elegans


Alignment Length:744 Identity:237/744 - (31%)
Similarity:372/744 - (50%) Gaps:83/744 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DDAGVFFSDNFGG----DNQQDAQINLQAVKKKYKEFIRTFNEE-NFFYKYRDTLKRNYLNGRYF 64
            :|..|...:|..|    |:..|..: .:.:::::|.|:|:|:|. |...||...:|....:.|..
 Worm   140 EDIPVDILENIRGRTIRDHVSDEAV-AKEIERRFKNFLRSFHEPGNKQTKYIQMIKSMAADNRES 203

  Fly    65 LEIEMEDLV--GFDETLADKLNKQPTEHLEIFEEAAREVADEITAPRPEHEEHMHDIQILLSSNA 127
            ||:...||.  ..::.::..|.:.|.|.|.|.:.||.||   :....|.:....::|::.:|...
 Worm   204 LEVSFTDLSDDNGEQNISYFLPEAPNEMLAIMDRAATEV---VMNMYPFYSRVCNEIKVRISQLP 265

  Fly   128 NPTNIRQLKSDCVSKLVKIAGIIVAASGISAKATRMSIQCLSCSTVIPNLKVNPGLEGYAL-PRK 191
            ...:||.|:...::.|::.||::..||||..:...:...|::|              ||.| |..
 Worm   266 VEEDIRMLRQVHLNMLIRTAGVVTIASGILPQLAVVKYDCVAC--------------GYLLGPFV 316

  Fly   192 CNTEQAGRPK-CP----LDPFFIMPDKCKCVDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCER 251
            ...::..||. ||    ..||.:..:.....::|.:.:||.|:.|..|.:||...:.....||:.
 Worm   317 QQNDEEVRPTICPSCQGKGPFELNVENTVYHNYQRITMQESPNKVAAGRLPRSKDVILLGDLCDS 381

  Fly   252 VVPGNRVLIQGIYSIRKVGKPSRRDGREKAVVGVRAPYMRVVGITVDSEGAGAISRYSNITSDEE 316
            ..||:.:.:.|:|:....|..:.:.|.......:.|.:     ||...:.|.     ..:|.::.
 Worm   382 CKPGDEIEVTGVYTNNFDGSLNYKQGFPVFNTLIHANH-----ITNKDKMAS-----DQLTDEDI 436

  Fly   317 EHFRRMAASGDIYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKRLPDGLCR-RGDINVLLLGDP 380
            :..|.::...:|.:|:..|:||||:|..|:|:||...||.|..|. |....| ||||||||.|||
 Worm   437 KAIRELSQDPNISQRVFSSIAPSIYGHDDVKRAIALALFRGEAKN-PGAKHRLRGDINVLLCGDP 500

  Fly   381 GTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFVMEGGAMVLADGGVVCIDEFD 445
            ||||||.|::...:||.:|.|:|:|:||.||||.|.:.|.||.:.:|.|||||||.||..|||||
 Worm   501 GTAKSQFLRYAAHIAPRSVLTTGQGASAVGLTAYVQRHPVTREWTLEAGAMVLADKGVCLIDEFD 565

  Fly   446 KMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSIFGRWDDTKG-EENIDFMPTILS 509
            ||.:.||.:||||||||:|||:||||.|:|::||:|:||:|.|.||::.|:. .||:|....|||
 Worm   566 KMSDQDRTSIHEAMEQQSISISKAGIVTSLHARCTVIAASNPIGGRYNPTRTFAENVDLTEPILS 630

  Fly   510 RFDMIFIVKDIHDESRDITLAKHIINVHLSSNKSAPSEPAEGE---------------ISLSTFK 559
            |||::.:::|..|...|..|||.::..|.:.:..|.....||:               |.....:
 Worm   631 RFDVLCVIRDSVDSVEDERLAKFVVGNHRTHHPDAKKIVKEGDELEEDQMDERTGVRLIPQDLLR 695

  Fly   560 KYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQLEAVIRISESLAK 624
            |||.|.|..|.|.|.|...||..:.:..||       |.|....|:.||||.:|::||:||:.||
 Worm   696 KYIIYAREKCHPTLPEQHSEKFSNIFAQMR-------KESMATGSVAITVRHVESMIRLSEAHAK 753

  Fly   625 IRLQPFATDEHVNEALRLFQVSTLDAAMTGSLAGAEGFTTEEDQETLNRIEKQLKRRFAIGSQVS 689
            :.|:.:..||....|:|:.               .|.|...:....:..::|...|........:
 Worm   754 LHLRSYVNDEDCAAAIRVM---------------LESFVNTQKASIMRMMKKTFSRHLTENRSAN 803

  Fly   690 E--QNILQDFLRQKYEERTVMKVIHTMIR 716
            |  ..||:..:||:....|......|:::
 Worm   804 ELLLFILKQLIRQQMHYATARAAAGTILQ 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..125 CDD:464206 25/96 (26%)
MCM 128..648 CDD:214631 194/542 (36%)
mcm-2NP_001022416.1 MCM2_N 48..>116 CDD:403724
MCM_N 169..262 CDD:464206 25/95 (26%)
MCM 270..777 CDD:214631 195/553 (35%)
Blue background indicates that the domain is not in the aligned region.

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