DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm5 and LOC1273388

DIOPT Version :10

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:XP_312356.3 Gene:LOC1273388 / 1273388 VectorBaseID:AGAMI1_009590 Length:834 Species:Anopheles gambiae


Alignment Length:638 Identity:190/638 - (29%)
Similarity:294/638 - (46%) Gaps:97/638 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 NIRQLKSDCVSKLVKIAGIIVAASGISAKATRMSIQCLSCSTVIPNLKVNPGLEGYALPRKCNTE 195
            :|..:|...:.|||.:.|.|:.|.......|..:.:|..|.:. ..::...|:  |..|..|:: 
Mosquito   215 SISSIKVSSMGKLVSVRGTIIRAGATQIMNTWCAFRCAQCGSE-QAVQQKDGI--YTTPTSCHS- 275

  Fly   196 QAGRPKCPLDPFFIMPDK---CKCVDFQTLKLQELP--DFVPQGEIPRHLQLFCDRSLCERVVPG 255
                 .|.....|::..:   .:...:|||:|||..  .....|...:::::.....|.:.|.||
Mosquito   276 -----GCKARSHFVLLQQSAFTRMEAYQTLRLQETTQGSRTVAGSAAKNIEIELTHELVDSVCPG 335

  Fly   256 NRVLIQGIYSIRKVGKPSRRDGREKAVVGVRAPYMRVVGITVDSEGAGAISRYSNITSDEEEHFR 320
            :.|.:.||...|   .....||..||  .:...|::.|.:..:.......:|.:..|..:.|..|
Mosquito   336 DDVTVTGILKAR---SQDGSDGAGKA--SMFKAYLQAVYVRSNKNVLANWNRLAEFTELDMEAIR 395

  Fly   321 RMAASGDIYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKRLPDGLCRRGDINVLLLGDPGTAKS 385
            .:.|....:..|.|||.|:|:|...:|..:...||||    :.:....|.:|:||::||||..||
Mosquito   396 LIKAEPSPFRLLVQSLCPTIYGHEIVKAGLLLGLFGG----MANTARTRAEIHVLVVGDPGIGKS 456

  Fly   386 QLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFV---MEGGAMVLADGGVVCIDEFDKM 447
            |:|:....|:|..::..|..||..|||.:|    :|...|   :|.||:||||.||.||||||||
Mosquito   457 QILQSCANVSPRGIFVCGTNSSNVGLTVTV----RTEKGVGASLEAGALVLADQGVCCIDEFDKM 517

  Fly   448 REDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSIFGRWDDTKG-EENIDFMPTILSRF 511
              .....:.|.|||:::|:||||:..|:.:|.:||||||...|.::..|. .||:...|.:||||
Mosquito   518 --SGHSGLLEVMEQRSVSVAKAGVICTVPARTTVLAAANPAGGHYNKAKTVSENLKLHPALLSRF 580

  Fly   512 DMIFIVKDIHDESRDITLAKHIINVH------LSSNKSAPSEP-----------AEGEISL---- 555
            |::||:.|..:|..|..|..||..||      .|..:..||.|           .|||..|    
Mosquito   581 DLVFILLDRSNERTDNLLTAHIQKVHGLAKAGSSHLQPQPSHPFFDASGHCSYEEEGEPPLEERL 645

  Fly   556 -------------STFKKYIHYCRTHCGPRLSEAAGEKLKSRYVLMRSGAGQQEKASDKRLSIPI 607
                         ...:|||.|.|.:..|:|:..|.|:|:..:|.:|       :|.:....||:
Mosquito   646 RLAPGEQMDLLPPEIVQKYIGYARKNVQPKLTAKAAEELREFFVELR-------RAHNHMDMIPV 703

  Fly   608 TVRQLEAVIRISESLAKIRLQPFATDEHVNEALRLFQVSTLDAAMTGSLAGAEGFTTEEDQETLN 672
            |.||||.:||::::.|||.|.|.||..||.:.|.:.:.|.||.           |:|:|......
Mosquito   704 TTRQLEGLIRLTQARAKIDLSPEATVAHVRDVLAILRQSMLDV-----------FSTDEGDLQFT 757

  Fly   673 RIEKQLKRRFAIGSQVSEQNILQDFLRQKYEERTVM-KVIHTMIRRGELQHRM 724
            |:..        ||..|:.::::.|.|.......|. ..::||   .||:..|
Mosquito   758 RLTN--------GSGTSKTSMVRKFARVLASRSAVTGTTLYTM---AELRQAM 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..125 CDD:464206
MCM 128..648 CDD:214631 173/559 (31%)
LOC1273388XP_312356.3 Mcm2 224..832 CDD:440854 188/629 (30%)
Blue background indicates that the domain is not in the aligned region.

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