DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm5 and mcm8

DIOPT Version :9

Sequence 1:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster
Sequence 2:XP_002665161.2 Gene:mcm8 / 100333576 ZFINID:ZDB-GENE-120927-1 Length:852 Species:Danio rerio


Alignment Length:781 Identity:224/781 - (28%)
Similarity:369/781 - (47%) Gaps:153/781 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VFFSDNFGGDNQQDAQINLQAVKKKYKEFIRTFNEENFFYKYRDTLKRNYLNGRYFLEIEMEDLV 73
            ::||:.|             .....|.|.|:.|  |.:|....|...::.:..:..:.::.:||:
Zfish    92 LYFSEGF-------------VESSPYVEKIKVF--EQYFTSQIDLYDKDEIERKGSILVDYKDLL 141

  Fly    74 GFDET------LADKLNKQPTEHLEIFEEAAREVADEITAPRPEH-------EEHMHDIQILLS- 124
            ...:.      ||..|.:.|.:.|:....|..:|   :|.....|       ||....|:.::: 
Zfish   142 SNKQVSHSLPDLARDLKEMPEKILDCLGVAIHQV---LTLDLERHAAELQGQEELPAGIRPIINI 203

  Fly   125 -------SNANP-TNIRQLKSDCVSKLVKIAGIIVAASGISAKATRMSIQCLSC----STVIPNL 177
                   .|..| |.::.|:::...|.|.|.|.:|..|.|.....:::..|.||    |..:|:.
Zfish   204 PHISARLYNYEPLTPLKSLRANLYGKFVVIRGTVVRVSNIKPLCMKLAFVCNSCGDTQSVTLPDG 268

  Fly   178 KVNPGLEGYALPRKC-NTEQAGRPKCP--LDPFFIMPDKCKCVDFQTLKLQEL--PDFVPQGEIP 237
            |       |.:|.|| .:|..||...|  ..||.:      .||:||:|:|||  .|....|.||
Zfish   269 K-------YTMPTKCLQSECRGRSFTPNRSSPFTL------TVDWQTIKVQELMSGDQRESGRIP 320

  Fly   238 RHLQLFCDRSLCERVVPGNRVLIQGIYSIRKVGKPSRRDGREKAVVGVRAPYMRVVGIT------ 296
            |.::....:.|.:..|||:.|.|.|:..:.. .:.|.|:.::|.:..:   |::...::      
Zfish   321 RTIECELTQDLVDSCVPGDMVTITGVIKVSN-EEGSTRNKKDKCMFLL---YIQANSVSNSKGQK 381

  Fly   297 ----VDSEGAGAISRYS--NITSDEEEHFRRMAASGDIYERLSQSLAPSIFGSRDIKKAITCMLF 355
                .:|||.|....:|  ::.:.:|     :.|..|:::.:..||.|.|:|...:|..:...||
Zfish   382 SKAVSESEGQGPSVEFSIKDLYAIQE-----IQAQEDLFKLIVNSLCPVIYGHLLVKAGLALALF 441

  Fly   356 GGSRKRLPD--GLCRRGDINVLLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKD 418
            ||.:|.:.|  .:..|||.::|::||||..|||:|:.|..|||..||..|..::.:|||.|:.:|
Zfish   442 GGCQKYVDDKNRIPIRGDPHMLIVGDPGLGKSQMLQAVCNVAPRGVYVCGNTTTTSGLTVSLSRD 506

  Fly   419 PQTRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLA 483
            ..:.::.:|.||:||.|.|:.||||||||....: |:.||||||:||:|||||..||.:|.|::|
Zfish   507 SGSGDYALEAGALVLGDQGICCIDEFDKMGSQHQ-ALLEAMEQQSISLAKAGIVCTLPARTSIIA 570

  Fly   484 AANSIFGRWDDTKGE---ENIDFMPTILSRFDMIFIVKDIHDESRDITLAKHII----------- 534
            |||.:.|.::  ||:   ||:.....:|||||::||:.|..:|..|..|::|::           
Zfish   571 AANPVGGHYN--KGKTVSENLKMGSALLSRFDLVFILLDTPNEDHDHLLSEHVMAMRAGKSGAVS 633

  Fly   535 -------NVHLSS---------------NKSAPSEPAEGEISLSTFKKYIHYCRTHCGPRLSEAA 577
                   |.|.||               .|..|.| |...|.....:||:.|.|.:..|.||..|
Zfish   634 GAAATRFNTHESSISILEVSSEKPLADTLKLVPGE-AFDPIPHQLLRKYVGYARHYVHPTLSAEA 697

  Fly   578 GEKLKSRYVLMRSGAGQQEKASDKRLSIPITVRQLEAVIRISESLAKIRLQPFATDEHVNEALRL 642
            .:.|:..|:.:|    :|.:.:|   |.|||.||||::||::|:.|::.|:..||.....:.:.:
Zfish   698 AQVLQDFYLELR----KQNQTAD---STPITTRQLESLIRLTEARARVELREKATQSDAEDVVEI 755

  Fly   643 FQVSTLDAAMTGSLAGAEGFTTEEDQETLNRIEKQLKRRFAIGSQVSEQNILQDFLR--QKYEER 705
            .:.|..|              |..|:  ..|::..   |..:||.:|.::.::.|:.  .|..||
Zfish   756 MKHSLTD--------------TYSDE--FGRLDFD---RSQLGSGMSNRSKVKKFVSALNKLAER 801

  Fly   706 T 706
            |
Zfish   802 T 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 21/105 (20%)
MCM 128..648 CDD:214631 186/579 (32%)
mcm8XP_002665161.2 Mcm2 110..801 CDD:224162 215/747 (29%)
MCM_N 111..235 CDD:291233 25/128 (20%)
AAA 451..605 CDD:99707 72/156 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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