DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art1 and Prmt3

DIOPT Version :9

Sequence 1:NP_650017.1 Gene:Art1 / 41295 FlyBaseID:FBgn0037834 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_446009.1 Gene:Prmt3 / 89820 RGDID:620413 Length:528 Species:Rattus norvegicus


Alignment Length:392 Identity:168/392 - (42%)
Similarity:233/392 - (59%) Gaps:32/392 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PMEAAVESATGITPNSNANSN---NVAKKLPAEGS-------------------------TGDNP 43
            |:.|......|::.|::|...   ..|:.|.||.:                         |..:.
  Rat   139 PVSAPFTYPNGLSENTSAVEKLKLMEARALSAEAALARAREDLQKMKQFAQDFVMNVDVRTCSST 203

  Fly    44 NANADEMTSRD-YYFDSYAHFGIHEEMLKDEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSM 107
            ...||.....| .||.||.|:|||||||||:|||.:||:.:|.|.|:|:.|.|||||||||||||
  Rat   204 TTIADLQEDEDGVYFSSYGHYGIHEEMLKDKVRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSM 268

  Fly   108 FAAKAGAAQVIAVDCSNIIEFARQVVIDNNLQDVITVVKGKIEEIELPNGIEGVDIIISEWMGYC 172
            |||||||.:|||||.|.|:..|..::..|.|:|.|.::||||||:.||  :|.||:||||||||.
  Rat   269 FAAKAGAKKVIAVDQSEILYQAMDIIRLNKLEDTIVLIKGKIEEVSLP--VEKVDVIISEWMGYF 331

  Fly   173 LFYESMLDTVLYARDKWLKKDGMMFPDRGTLYITAIEDRQYKDEKINWWDDVYGFDMSCIRKVAV 237
            |.:|||||:||||:.|:|.|.|.::||..|:.:.|:.|.....::|.:|||||||:|||::|..:
  Rat   332 LLFESMLDSVLYAKSKYLAKGGSVYPDICTISLVAVSDVSKHADRIAFWDDVYGFNMSCMKKAVI 396

  Fly   238 TEPLVDVVDPKQVVSTSCMVKEVDLYTVQKADLNFSSKFSLCIKRNDFVQALVTYFNIEFTK-CH 301
            .|.:|:|||.|.::|..|.:|.:|.:|...:||.|||.|:|...:.....|:..||:|.|.| ||
  Rat   397 PEAVVEVVDHKTLISDPCDIKHIDCHTTSISDLEFSSDFTLRTTKTAMCTAVAGYFDIYFEKNCH 461

  Fly   302 KRLGFSTSPDSTYTHWKQTVFYLDDHMTAKKNEEITGTFQMKPNERNNRDLDFVIDINFKGELSQ 366
            .|:.|||.|.||.||||||:|.|:.....|..|.:.|...:..|:::.|.|...:.:|...:...
  Rat   462 NRVVFSTGPQSTKTHWKQTIFLLEKPFPVKAGEALKGKITVHKNKKDPRSLIVTLTLNSSTQTYS 526

  Fly   367 IQ 368
            :|
  Rat   527 LQ 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art1NP_650017.1 AdoMet_MTases 94..194 CDD:100107 64/99 (65%)
Prmt3NP_446009.1 zf-C2H2_2 48..>97 CDD:289522
AdoMet_MTases 256..356 CDD:100107 65/101 (64%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D432852at33208
OrthoFinder 1 1.000 - - FOG0000206
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.