DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art1 and Gstcd

DIOPT Version :9

Sequence 1:NP_650017.1 Gene:Art1 / 41295 FlyBaseID:FBgn0037834 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001343238.1 Gene:Gstcd / 67553 MGIID:1914803 Length:634 Species:Mus musculus


Alignment Length:134 Identity:33/134 - (24%)
Similarity:48/134 - (35%) Gaps:52/134 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 SCMV-----KEVDLYTVQKA--DLNFSSKFSLCIKRNDFVQALVTY----FNI------------ 295
            ||.|     ||:.|...:|.  :|..|:.:        |:||.:.|    |||            
Mouse   466 SCQVTLIENKELSLIRAKKRSDELGLSNIW--------FIQANMEYFTGMFNIGVALHACGVATD 522

  Fly   296 -----------EFTKCHKRLGF--STS----PDSTYTHWKQTVFYLDDHMTAKKNEEITGTFQMK 343
                       .|..|....||  :||    |.|  ..:|:|:.| .:||...:..:.|.. |:.
Mouse   523 MVIEHCIQTRASFITCPCCYGFIQNTSKFNFPKS--EKFKKTLSY-KEHMLLCRFADQTAV-QLP 583

  Fly   344 PNER 347
            |..|
Mouse   584 PERR 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art1NP_650017.1 AdoMet_MTases 94..194 CDD:100107
GstcdNP_001343238.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..233
GST_C_family <271..330 CDD:322082
AdoMet_MTases 424..542 CDD:327401 18/83 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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