DRSC/TRiP Functional Genomics Resources

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Protein Alignment Art1 and Carm1

DIOPT Version :10

Sequence 1:NP_650017.1 Gene:Art1 / 41295 FlyBaseID:FBgn0037834 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001025212.1 Gene:Carm1 / 363026 RGDID:1305879 Length:608 Species:Rattus norvegicus


Alignment Length:364 Identity:126/364 - (34%)
Similarity:190/364 - (52%) Gaps:30/364 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TPNSNANSNNVAKKLPAEGSTGD-NPNANADEMTSRDYYFDSYAHFGIHEEMLKDEVRTVTYRNA 82
            ||:...:..|:.|  ...|.|.: :..:...|.:|...||..|.:....:.|::|.|||.||:.|
  Rat   114 TPHDFCSFYNILK--TCRGHTLERSVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRA 176

  Fly    83 MYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAAQVIAVDCSNIIEFARQVVIDNNLQDVITVVKG 147
            :..|...|:.|.|||||||:||||.|||:|||.::.||:.|.:.:.|..:|..|||.|.|.|:.|
  Rat   177 ILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPG 241

  Fly   148 KIEEIELPNGIEGVDIIISEWMGYCLFYESMLDTVLYARDKWLKKDGMMFPDRGTLYITAIEDRQ 212
            |:||:.||   |.|||||||.|||.||.|.||::.|:|: |:||..|.|||..|.:::....|.|
  Rat   242 KVEEVSLP---EQVDIIISEPMGYMLFNERMLESYLHAK-KYLKPSGNMFPTIGDVHLAPFTDEQ 302

  Fly   213 -YKDE--KINWW--DDVYGFDMSCIRKVAVTE----PLVDVVDPKQVVSTSCM-------VKEVD 261
             |.::  |.|:|  ...:|.|:|.:|..||.|    |:||..|.:.:::.|..       .||.|
  Rat   303 LYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGD 367

  Fly   262 LYTVQKADLNFSSKFSLCIKRNDFVQALVTYFNIEFTKCHKRLGFSTSPDSTYTHWKQTVFYLDD 326
            |:.::       ..|...:..:..|..|..:|::.|......:..||:|....|||.|.......
  Rat   368 LHRIE-------IPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQS 425

  Fly   327 HMTAKKNEEITGTFQMKPNERNNRDLDFVIDINFKGELS 365
            .:.||..:.::||..:..|:|.:.|:..|..::..|..|
  Rat   426 PLFAKAGDTLSGTCLLIANKRQSYDISIVAQVDQTGSKS 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art1NP_650017.1 COG4076 66..>231 CDD:443253 79/169 (47%)
Carm1NP_001025212.1 CARM1 35..139 CDD:402914 6/26 (23%)
COG4076 160..347 CDD:443253 88/190 (46%)

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