DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art1 and strm-1

DIOPT Version :9

Sequence 1:NP_650017.1 Gene:Art1 / 41295 FlyBaseID:FBgn0037834 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_497549.2 Gene:strm-1 / 175358 WormBaseID:WBGene00019198 Length:334 Species:Caenorhabditis elegans


Alignment Length:288 Identity:59/288 - (20%)
Similarity:92/288 - (31%) Gaps:72/288 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TGDNPNANADEMTSR---------DYYFDSYAHF------GIH-EEMLKDEVRTVTYRNAMYHNK 87
            |||:.     |:||.         |.||....||      |.. ||.||.....:..:..:..|.
 Worm    38 TGDHL-----EVTSHYYSVMSTVIDEYFGGNFHFVPPKFEGQKLEEALKSLHCHIAEKLELSENV 97

  Fly    88 HLFQGKTVLDVGCGTGILSMFAAKAGAAQVIAVDCSNIIEFARQVVIDNNLQDVITVVKGKIEEI 152
            |      .||:|||.|.:.:..|..||.........|..|...:...:..:.|...:|....:::
 Worm    98 H------CLDIGCGIGGVMLDIADFGAKLTGVTIAPNEAEIGNEKFANMGISDRCKIVAADCQKM 156

  Fly   153 ELPNGIEGVDIIISEWMGYCLFYESMLDTVLYARDKWLKKDGMMFPDRGTLYITAIEDRQYKDEK 217
            ...:....|...|     |.|.|...||.|:....:.||..|..      :....|:...|..:.
 Worm   157 PFEDSTFDVAYAI-----YSLKYIPNLDKVMKEIQRVLKPGGKF------IVYDLIKTNDYDKDN 210

  Fly   218 INWWDDVYGFDMSCIRKVAVTEPLVDVVDPKQVVSTSCMVKEVDLYTVQKADLNFSSKFSLCIKR 282
            ...:..::..:.:|......|:..|:....|.           ::..|::.:|.           
 Worm   211 KEHYKTLHHLEYACGMPSLHTQSEVEAAAEKW-----------EMPVVERENLE----------- 253

  Fly   283 NDFVQALVTYFNIEFTKCHKRLGFSTSP 310
                   .||.|..|..|     ||.||
 Worm   254 -------ETYGNRAFHYC-----FSASP 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art1NP_650017.1 AdoMet_MTases 94..194 CDD:100107 23/99 (23%)
strm-1NP_497549.2 Methyltransf_11 100..197 CDD:285453 24/107 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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