DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp1 and IST3

DIOPT Version :10

Sequence 1:NP_731510.1 Gene:Rbp1 / 41294 FlyBaseID:FBgn0260944 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_012270.1 Gene:IST3 / 854821 SGDID:S000001444 Length:148 Species:Saccharomyces cerevisiae


Alignment Length:86 Identity:22/86 - (25%)
Similarity:46/86 - (53%) Gaps:9/86 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YREWDLACK----VYVGNLGSSASKHEIEGAFAKYGPLRNVWVARN-----PPGFAFVEFEDRRD 59
            ::.|....|    :|:|||....::.:|...|::||...:|.::|:     ..|||::::||:|.
Yeast    20 HQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRS 84

  Fly    60 AEDATRALDGTRCCGTRIRVE 80
            ...|...|:|.:..|..::::
Yeast    85 TILAVDNLNGFKIGGRALKID 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp1NP_731510.1 RRM_SRSF3_like 12..81 CDD:409808 21/78 (27%)
IST3NP_012270.1 RRM_ist3_like 22..109 CDD:409845 22/84 (26%)

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