Protein Alignment Rbp1 and RS41

DIOPT Version :9

• Sequence 1: NP_731510.1
• Gene: Rbp1 / 41294
• FlyBaseID: FBgn0260944
• Length: 144
• Species: Drosophila melanogaster
• Sequence 2: NP_200017.2
• Gene: RS41 / 835279
• AraportID: AT5G52040
• Length: 357
• Species: Arabidopsis thaliana
• Alignment Length: 106
• Identity: 41/106 - (38%)
• Similarity: 54/106 - (50%)
• Gaps: 14/106 - (13%)

  Fly    13 VYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC--CGT 75
            |:.||....|.:.::|..|.|||.:..|.:   ..|||||..||.||||||.||||....  .|.
plant     4 VFCGNFEYDARESDLERLFRKYGKVERVDM---KAGFAFVYMEDERDAEDAIRALDRFEYGRTGR 65

  Fly    76 RIRVEMSSGRSRDRRRGEGGSSGRSGSGRYRITPSARTTST 116
            |:|||.:        :.:.|.:||||..| |.:...|.:.|
plant    66 RLRVEWT--------KNDRGGAGRSGGSR-RSSSGLRPSKT 97

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp1	NP_731510.1	RRM_SRSF3_like	12..81	CDD:409808	31/69 (45%)
RS41	NP_200017.2	RRM1_AtRSp31_like	2..73	CDD:409680	32/79 (41%)
		RRM	9..289	CDD:223796	38/101 (38%)
		RRM2_AtRSp31_like	97..166	CDD:409899	1/1 (100%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23147
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010