DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp1 and zcrb1

DIOPT Version :10

Sequence 1:NP_731510.1 Gene:Rbp1 / 41294 FlyBaseID:FBgn0260944 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_001017589.2 Gene:zcrb1 / 550251 ZFINID:ZDB-GENE-041210-114 Length:218 Species:Danio rerio


Alignment Length:103 Identity:28/103 - (27%)
Similarity:48/103 - (46%) Gaps:17/103 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VYVGNLGSSASKHEIEGAFAKYGPLRNVWV-----ARNPPGFAFVEFEDRRDAEDATRALDGTRC 72
            |||.|:..|.:..::....:|||.:..|.:     .|...|.|||.|.||..|.:.:|:|:..:.
Zfish    12 VYVSNIPFSLTNSDMHKLCSKYGKVVKVTIVKDKHTRMSKGVAFVLFLDRESAYNCSRSLNNKQL 76

  Fly    73 CGTRIR--VEMSSGRSRD--RRRG--------EGGSSG 98
            .|..::  :.:.:||:.:  |:|.        |.|..|
Zfish    77 FGRMVKASIAIDNGRAAEFIRKRNYTDKSKCYECGEEG 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp1NP_731510.1 RRM_SRSF3_like 12..81 CDD:409808 21/74 (28%)
zcrb1NP_001017589.2 RRM_ZCRB1 9..84 CDD:409827 21/71 (30%)
PTZ00368 107..>126 CDD:173561 3/8 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..218
Blue background indicates that the domain is not in the aligned region.

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