Protein Alignment Rbp1 and SC35

DIOPT Version :10

• Sequence 1: NP_731510.1
• Gene: Rbp1 / 41294
• FlyBaseID: FBgn0260944
• Length: 144
• Species: Drosophila melanogaster
• Sequence 2: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Alignment Length: 113
• Identity: 40/113 - (35%)
• Similarity: 53/113 - (46%)
• Gaps: 12/113 - (10%)

  Fly    15 VGNLGSSASKHEIEGAFAKYGPLRNVWV-----ARNPPGFAFVEFEDRRDAEDATRALDGTRCCG 74
            |.||....:..::...|.:.|.:.::::     .|...|||||.|.|:||||||..|:||....|
  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91

  Fly    75 TRIRVEM-------SSGRSRDRRRGEGGSSGRSGSGRYRITPSARTTS 115
            ..:||:|       |..||...|||.||..|..|..|.|.....|..|
  Fly    92 RELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRS 139

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp1	NP_731510.1	RRM_SRSF3_like	12..81	CDD:409808	25/70 (36%)
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	24/69 (35%)