Protein Alignment Rbp1 and SF2

DIOPT Version :10

• Sequence 1: NP_731510.1
• Gene: Rbp1 / 41294
• FlyBaseID: FBgn0260944
• Length: 144
• Species: Drosophila melanogaster
• Sequence 2: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Alignment Length: 115
• Identity: 46/115 - (40%)
• Similarity: 57/115 - (49%)
• Gaps: 22/115 - (19%)

  Fly    11 CKVYVGNLGSSASKHEIEGAFAKYG-----PLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGT 70
            |::|||||.......:|:..|.|:|     .|:|   .|.|| ||||||||.|||:||.:|.||.
  Fly     7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKN---RRGPP-FAFVEFEDARDADDAVKARDGY 67

  Fly    71 RCCGTRIRVEM---------SSGRSRDRRRGEGGSSGRSG----SGRYRI 107
            ...|.|:|||.         ..|...||.|..||..|..|    ..:||:
  Fly    68 DYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRV 117

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp1	NP_731510.1	RRM_SRSF3_like	12..81	CDD:409808	34/73 (47%)
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	36/76 (47%)
		RRM2_SRSF1_like	115..188	CDD:410013	2/3 (67%)