DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp1 and tra2a

DIOPT Version :10

Sequence 1:NP_731510.1 Gene:Rbp1 / 41294 FlyBaseID:FBgn0260944 Length:144 Species:Drosophila melanogaster
Sequence 2:XP_012819962.1 Gene:tra2a / 448073 XenbaseID:XB-GENE-492325 Length:341 Species:Xenopus tropicalis


Alignment Length:109 Identity:34/109 - (31%)
Similarity:48/109 - (44%) Gaps:18/109 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VYVGNLGSS--ASKHEIEGAFAKYGPLRNVWVARN-----PPGFAFVEFEDRRDAEDATRALDGT 70
            :.:|..|.|  .::.::...|::||||..|.|..:     ..|||||.||...|:.:|....:|.
 Frog   114 ICIGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHANGM 178

  Fly    71 RCCGTRIRVEMSSGR-----------SRDRRRGEGGSSGRSGSG 103
            ...|.||||:.|..:           .|....|.||..|.||.|
 Frog   179 ELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGSGGG 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp1NP_731510.1 RRM_SRSF3_like 12..81 CDD:409808 25/74 (34%)
tra2aXP_012819962.1 RRM_TRA2A 110..193 CDD:410047 26/78 (33%)

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