Protein Alignment Rbp1 and srsf5b

DIOPT Version :10

• Sequence 1: NP_731510.1
• Gene: Rbp1 / 41294
• FlyBaseID: FBgn0260944
• Length: 144
• Species: Drosophila melanogaster
• Sequence 2: NP_001002610.1
• Gene: srsf5b / 436883
• ZFINID: ZDB-GENE-040718-354
• Length: 285
• Species: Danio rerio
• Alignment Length: 136
• Identity: 46/136 - (33%)
• Similarity: 65/136 - (47%)
• Gaps: 27/136 - (19%)

  Fly    11 CKVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGT 75
            |::::|.|..||.:.::|..|..||.:|::.:.|   ||.||||:|.||||||...|||...|..
Zfish     4 CRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKELCNE 65

  Fly    76 RIRVEMSSGRSRDRRRGEGGSSGRSGSGRY------------RITPSARTTSTATSSFYNINNLQ 128
            |:.:|.:..|.|       |..||.|.||:            |..|..||.:...     :.||.
Zfish    66 RVTIEHARVRLR-------GGRGRGGGGRFPARYGRGSQDSRRNPPPMRTENRLI-----VENLS 118

  Fly   129 QQPSSQ 134
            .:.|.|
Zfish   119 SRVSWQ 124

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp1	NP_731510.1	RRM_SRSF3_like	12..81	CDD:409808	28/68 (41%)
srsf5b	NP_001002610.1	RRM1_SRSF5	5..74	CDD:410008	29/71 (41%)
		RRM2_SRSF5	101..181	CDD:410158	8/29 (28%)