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Protein Alignment Rbp1 and srsf5b
DIOPT Version :9
Sequence 1: | NP_731510.1 |
Gene: | Rbp1 / 41294 |
FlyBaseID: | FBgn0260944 |
Length: | 144 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001002610.1 |
Gene: | srsf5b / 436883 |
ZFINID: | ZDB-GENE-040718-354 |
Length: | 285 |
Species: | Danio rerio |
Alignment Length: | 136 |
Identity: | 46/136 - (33%) |
Similarity: | 65/136 - (47%) |
Gaps: | 27/136 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 CKVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGT 75
|::::|.|..||.:.::|..|..||.:|::.:.| ||.||||:|.||||||...|||...|..
Zfish 4 CRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKELCNE 65
Fly 76 RIRVEMSSGRSRDRRRGEGGSSGRSGSGRY------------RITPSARTTSTATSSFYNINNLQ 128
|:.:|.:..|.| |..||.|.||: |..|..||.:... :.||.
Zfish 66 RVTIEHARVRLR-------GGRGRGGGGRFPARYGRGSQDSRRNPPPMRTENRLI-----VENLS 118
Fly 129 QQPSSQ 134
.:.|.|
Zfish 119 SRVSWQ 124
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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