Protein Alignment Rbp1 and B52

DIOPT Version :10

• Sequence 1: NP_731510.1
• Gene: Rbp1 / 41294
• FlyBaseID: FBgn0260944
• Length: 144
• Species: Drosophila melanogaster
• Sequence 2: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Alignment Length: 138
• Identity: 45/138 - (32%)
• Similarity: 65/138 - (47%)
• Gaps: 23/138 - (16%)

  Fly    12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTR 76
            :||||.|.....:.::|..|..||..|::.:..   |:.||||||.|||:||...|:|....|.|
  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGKELLGER 66

  Fly    77 IRVEMSSGRSRDRRRGE-----GGSSGRSGSGRYRITPSARTTSTATSSFYN----------INN 126
            :.||.:.|.:|...|..     ||..| .|.|||    :.:..::.:||.|.          :.|
  Fly    67 VVVEPARGTARGSNRDRYDDRYGGRRG-GGGGRY----NEKNKNSRSSSRYGPPLRTEYRLIVEN 126

  Fly   127 LQQQPSSQ 134
            |..:.|.|
  Fly   127 LSSRVSWQ 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp1	NP_731510.1	RRM_SRSF3_like	12..81	CDD:409808	27/68 (40%)
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	28/71 (39%)
		RRM2_SRSF4_like	120..191	CDD:410012	4/15 (27%)