DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp1 and rbm14b

DIOPT Version :10

Sequence 1:NP_731510.1 Gene:Rbp1 / 41294 FlyBaseID:FBgn0260944 Length:144 Species:Drosophila melanogaster
Sequence 2:XP_021333123.2 Gene:rbm14b / 402858 ZFINID:ZDB-GENE-040426-2455 Length:560 Species:Danio rerio


Alignment Length:145 Identity:37/145 - (25%)
Similarity:63/145 - (43%) Gaps:18/145 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTR 76
            ||:||||.|..:..:::..|..:|   .|.......|:|||..|::.||..|..||.||...|..
Zfish    84 KVFVGNLSSMCTTEDLQELFQTFG---KVLECDKVKGYAFVHMENKEDALQAIEALHGTSFKGRP 145

  Fly    77 IRVEMSSGR-SRDRRRG---------EGGSSGRSGSGR-----YRITPSARTTSTATSSFYNINN 126
            :.||:|..: |:....|         :|..:|...:|:     |:...:....:.|.::...:..
Zfish   146 LSVELSKVQPSKQTPTGKIPCVSCGKQGHYAGECPAGKPTLEQYQSQAAVLAAAAAAAAGLPLQV 210

  Fly   127 LQQQPSSQPQPATFN 141
            .|...:|....:||:
Zfish   211 QQSVHNSVYNTSTFD 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp1NP_731510.1 RRM_SRSF3_like 12..81 CDD:409808 24/68 (35%)
rbm14bXP_021333123.2 None

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