Protein Alignment Rbp1 and srsf3a

DIOPT Version :9

• Sequence 1: NP_731510.1
• Gene: Rbp1 / 41294
• FlyBaseID: FBgn0260944
• Length: 144
• Species: Drosophila melanogaster
• Sequence 2: NP_001002053.1
• Gene: srsf3a / 368925
• ZFINID: ZDB-GENE-030616-631
• Length: 174
• Species: Danio rerio
• Alignment Length: 123
• Identity: 70/123 - (56%)
• Similarity: 78/123 - (63%)
• Gaps: 8/123 - (6%)

  Fly     5 REWDLACKVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69
            |:..|.|||||||||:|.:|.|:|.||..|||||:|||||||||||||||||.|||.||.|.|||
Zfish     8 RDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDG 72

  Fly    70 TRCCGTRIRVEMSSGRSRDRRRGEGGSSGRSGSGRY--------RITPSARTTSTATS 119
            ...||.|:|||||:|..|.|.||...|..|.....|        |.:|.||..|...|
Zfish    73 RTLCGCRVRVEMSNGEKRSRFRGPPPSWSRRPRDDYRRGDDYRRRSSPPARHRSPRRS 130

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp1	NP_731510.1	RRM_SRSF3_like	12..81	CDD:409808	50/68 (74%)
srsf3a	NP_001002053.1	RRM_SF	10..90	CDD:302621	56/79 (71%)
		RRM	<13..>97	CDD:223796	59/83 (71%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170596090
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0107
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1533297at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	4	3.800