Protein Alignment Rbp1 and SPBC1861.04c

DIOPT Version :9

• Sequence 1: NP_731510.1
• Gene: Rbp1 / 41294
• FlyBaseID: FBgn0260944
• Length: 144
• Species: Drosophila melanogaster
• Sequence 2: NP_596721.1
• Gene: SPBC1861.04c / 2539617
• PomBaseID: SPBC1861.04c
• Length: 1014
• Species: Schizosaccharomyces pombe
• Alignment Length: 119
• Identity: 29/119 - (24%)
• Similarity: 53/119 - (44%)
• Gaps: 7/119 - (5%)

  Fly    12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVAR---NPPGFAFVEFEDRRDAEDATRALDGTRCC 73
            ::||.|:....::.::|..|..||.:.:|.:.:   ...||.:|.....:|||:|..|  ..:..
pombe   758 ELYVTNIDFKVNEKDVETFFRDYGQVESVRIPKRFNQHKGFGYVVMTTNQDAENALSA--AGKQL 820

  Fly    74 GTRI-RVEMSSGRSRDRRRGEGGSSGRSGSGRYRITPSARTTSTATSSFYNINN 126
            |.|: .|.:|..|....:.....:..|:.:..:..|.|.: .||...||..|.:
pombe   821 GNRVLNVVLSKPRESLEKTRVSSNDNRTLAKSFETTESNK-MSTPKKSFEQIKS 873

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp1	NP_731510.1	RRM_SRSF3_like	12..81	CDD:409808	19/72 (26%)
SPBC1861.04c	NP_596721.1	RRM1_Prp24	590..662	CDD:240742
		RRM2_Prp24	666..743	CDD:240743
		RRM3_Prp24	757..829	CDD:240744	19/72 (26%)
		RRM4_Prp24	874..943	CDD:240745	29/119 (24%)
		Lsm_interact	996..1014	CDD:283133

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23147
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100