DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp1 and Y57G11A.5

DIOPT Version :10

Sequence 1:NP_731510.1 Gene:Rbp1 / 41294 FlyBaseID:FBgn0260944 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_502757.2 Gene:Y57G11A.5 / 190364 WormBaseID:WBGene00013293 Length:110 Species:Caenorhabditis elegans


Alignment Length:84 Identity:35/84 - (41%)
Similarity:53/84 - (63%) Gaps:2/84 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTR 76
            :|||||:...|::.|||..|:..||::::|:|:.|||||||.|:....|.||.:.|:|.:.|...
 Worm    18 QVYVGNMPFDATEKEIEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHAFDAVKYLNGKKICDLE 82

  Fly    77 IRVEMSSGRSRD--RRRGE 93
            .:|||.....::  |||.|
 Worm    83 AKVEMCEVDFKEDLRRRME 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp1NP_731510.1 RRM_SRSF3_like 12..81 CDD:409808 29/68 (43%)
Y57G11A.5NP_502757.2 RRM_SF 19..87 CDD:473069 29/67 (43%)

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