DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rbp1 and rsp-3

DIOPT Version :9

Sequence 1:	NP_731510.1	Gene:	Rbp1 / 41294	FlyBaseID:	FBgn0260944	Length:	144	Species:	Drosophila melanogaster
Sequence 2:	NP_001370111.1	Gene:	rsp-3 / 176688	WormBaseID:	WBGene00004700	Length:	258	Species:	Caenorhabditis elegans

Alignment Length:	131	Identity:	56/131 - (42%)
Similarity:	63/131 - (48%)	Gaps:	28/131 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MPRYREWDLACKVYVGNLGSSASKHEIEGAFAKYGPLRNVWV-ARNPPGFAFVEFEDRRDAEDAT 64
            |||....|.  |||||||.....:.|:|..|.|||.::.|.: :...|.||||||||.||||||.
Worm     1 MPRGGSEDQ--KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAV 63

  Fly    65 RALDGTRCCGTRIRVEMSSG-----------------RSRDRRRGEGGSSGRSGSGRYRITPSAR 112
            ||.||....|.|||||.:.|                 |..|.|.|.||  ||.|.      |..|
Worm    64 RARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGG--GRGGG------PQRR 120

  Fly   113 T 113
            |
Worm   121 T 121

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbp1	NP_731510.1	RRM_SRSF3_like	12..81	CDD:409808	38/69 (55%)
rsp-3	NP_001370111.1	RRM1_SRSF1_like	10..80	CDD:409775	38/69 (55%)
rsp-3	NP_001370111.1	RRM2_SRSF1_like	123..196	CDD:410013
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910