DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp1 and Srsf10

DIOPT Version :10

Sequence 1:NP_731510.1 Gene:Rbp1 / 41294 FlyBaseID:FBgn0260944 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_001073856.1 Gene:Srsf10 / 14105 MGIID:1333805 Length:262 Species:Mus musculus


Alignment Length:138 Identity:43/138 - (31%)
Similarity:69/138 - (50%) Gaps:15/138 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VYVGNLGSSASKHEIEGAFAKYGPLRNVWV-----ARNPPGFAFVEFEDRRDAEDATRALDGTRC 72
            ::|.|:.......::...|.:|||:.:|:|     .|.|.|||:|:|||.||||||...||....
Mouse    12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWI 76

  Fly    73 CGTRIRVEMSSG--RSRDRRRGEGGSSGRSGS-----GRYRITPS---ARTTSTATSSFYNINNL 127
            ||.:|.::.:.|  ::.::.:.:.|.:..|.|     .|||.:.|   .|..|.:.|..||....
Mouse    77 CGRQIEIQFAQGDRKTPNQMKAKEGRNVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRS 141

  Fly   128 QQQPSSQP 135
            ....:|:|
Mouse   142 YSPRNSRP 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp1NP_731510.1 RRM_SRSF3_like 12..81 CDD:409808 28/72 (39%)
Srsf10NP_001073856.1 RRM_SF 5..99 CDD:473069 29/86 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..262 10/34 (29%)

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