DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp1 and SC35

DIOPT Version :10

Sequence 1:NP_731510.1 Gene:Rbp1 / 41294 FlyBaseID:FBgn0260944 Length:144 Species:Drosophila melanogaster
Sequence 2:XP_061513963.1 Gene:SC35 / 1279150 VectorBaseID:AGAMI1_006283 Length:167 Species:Anopheles gambiae


Alignment Length:144 Identity:41/144 - (28%)
Similarity:62/144 - (43%) Gaps:20/144 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VGNLGSSASKHEIEGAFAKYGPLRNVWV-----ARNPPGFAFVEFEDRRDAEDATRALDGTRCCG 74
            |.||....:..::...|.:.|.:.::::     .|...|||||.|.|:||||||..|:||....|
Mosquito    19 VDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAEDALDAMDGRMLDG 83

  Fly    75 TRIRVEMS---------------SGRSRDRRRGEGGSSGRSGSGRYRITPSARTTSTATSSFYNI 124
            ..:||:|:               :||.|.|.|.......||.|..:|....:|:.|....|....
Mosquito    84 RELRVQMARYGRPTSPQRRGNRYNGRERGRSRERHRRRSRSRSPEHRRRSYSRSKSRTPRSRSGS 148

  Fly   125 NNLQQQPSSQPQPA 138
            .:.:.:.|....||
Mosquito   149 KSSRGKDSRSRSPA 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp1NP_731510.1 RRM_SRSF3_like 12..81 CDD:409808 25/70 (36%)
SC35XP_061513963.1 None

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