DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp1 and SRSF8

DIOPT Version :10

Sequence 1:NP_731510.1 Gene:Rbp1 / 41294 FlyBaseID:FBgn0260944 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_115285.1 Gene:SRSF8 / 10929 HGNCID:16988 Length:282 Species:Homo sapiens


Alignment Length:150 Identity:49/150 - (32%)
Similarity:67/150 - (44%) Gaps:30/150 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VGNLGSSASKHEIEGAFAKYGPLRNVWVARN-----PPGFAFVEFEDRRDAEDATRALDGTRCCG 74
            |.||....|...:...|.|||.:.:|::.|.     |.|||||.|.|||||:||..|:||....|
Human    18 VDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDG 82

  Fly    75 TRIRVEMS-----------SGRSRDRRRGEG--------GSSGRSGSGRYRIT---PS---ARTT 114
            ..:||:::           .|..|.|.||.|        |...||...|:|..   ||   :|:.
Human    83 RELRVQVARYGRRDLPRSRQGEPRGRSRGGGYGRRSRSYGRRSRSPRRRHRSRSRGPSCSRSRSR 147

  Fly   115 STATSSFYNINNLQQQPSSQ 134
            |....|.|:.:...:.|.|:
Human   148 SRYRGSRYSRSPYSRSPYSR 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp1NP_731510.1 RRM_SRSF3_like 12..81 CDD:409808 30/70 (43%)
SRSF8NP_115285.1 RRM_SRSF2_SRSF8 16..88 CDD:409751 29/69 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..282 19/76 (25%)

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