DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL37 and mrpl-37

DIOPT Version :9

Sequence 1:NP_524306.3 Gene:mRpL37 / 41293 FlyBaseID:FBgn0261380 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_496850.3 Gene:mrpl-37 / 175001 WormBaseID:WBGene00013004 Length:432 Species:Caenorhabditis elegans


Alignment Length:442 Identity:99/442 - (22%)
Similarity:158/442 - (35%) Gaps:86/442 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KHWLVQGRRVPKETGAAAELLK------------LGVLVKNPEDLLNAKVEKKLVDIVGARE--- 67
            |.|.....|:.||...:....|            |||.|..|.::......|.||: ..|:|   
 Worm    10 KQWGKMDTRIFKEIYNSRNKRKMPAFEVPDAVKALGVPVFEPNEIFQLSNRKNLVE-QAAKEHME 73

  Fly    68 ---------KPVPEDSRHPDWHPTVCNTYSDNSVLIGGLPQAQVLTNSIVIQTFPKHIEDAIASQ 123
                     :..|....||.:........||      |:.||.|||.|:|            |:.
 Worm    74 NELKFTEPPQQHPLQKSHPAYIFEAAEPMSD------GIAQAAVLTRSVV------------ATG 120

  Fly   124 QLPNSV-----------DKSVRHAILASHVLDAEQVKLPKVRLPERPAFNLPRSYGISHERVNRL 177
            .||:::           ::.|:.|||.....:....|||....|.......||.:|....:.|.:
 Worm   121 GLPDTILLNSAAKLEIDEEMVKDAILHGERYNPSLEKLPARFDPVMFWIRHPRLHGTPVIKKNNI 185

  Fly   178 LVNKLLHESEKLAGRSVSVRRKLIDN--------ASFKTFLSKDGDLLGFSINAEKVVFANRAIE 234
            ::|.||........|:.::::....|        .|...:.||:..:|    .|:..:....|..
 Worm   186 ILNNLLRHVVLGGLRTQALKQNFQVNRDSPLSVYVSGGQYFSKNALVL----RAQPHLTVQSADS 246

  Fly   235 GVKGKFEG----------DLPDLYPMKSTISIPKYHIYQAKNLYPLRSDITCSHPHTIFTVFNKH 289
            .|...:.|          .|||:||:...|......||....|...||....:|.|:|  ::::.
 Worm   247 TVTMPWAGPIDVKAVCAEPLPDIYPISPVIDFSMDTIYNDDVLLTRRSQQQKTHIHSI--LWSRE 309

  Fly   290 QVKNSHGSEVTTSQLQARTLVKAFVVAAARAKQLHGDSVGALPKPIVVQSVQTDGRTFHFGVLQL 354
            |   ......|:.|..|..::..:  |||.|:.....:...|.||::|:.||..........:||
 Worm   310 Q---DQKYPWTSEQNMANAILTTY--AAAVAEATRNGATTELEKPLLVRGVQLVNGRLDLVAMQL 369

  Fly   355 NTL---DLGANSTAKNYWFHRQNYNLFAECSYEGGRTHLDNYNGEVFRIFNA 403
            |||   ....|:..||..:..:...|:....|......::..:..||..|.|
 Worm   370 NTLKPTSEAGNNDEKNIVWIEKGLRLYKPTPYYEQMDTVEKLDMTVFHKFVA 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL37NP_524306.3 PDCD9 <334..405 CDD:284543 18/73 (25%)
mrpl-37NP_496850.3 PDCD9 <300..424 CDD:284543 31/129 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166719
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C9WK
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 49 1.000 Inparanoid score I4114
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29063
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007290
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_107906
Panther 1 1.100 - - LDO PTHR15889
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3514
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.790

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