DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cap-H2 and NCAPH2

DIOPT Version :10

Sequence 1:NP_650014.2 Gene:Cap-H2 / 41289 FlyBaseID:FBgn0037831 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_001171940.1 Gene:NCAPH2 / 29781 HGNCID:25071 Length:606 Species:Homo sapiens


Alignment Length:853 Identity:151/853 - (17%)
Similarity:265/853 - (31%) Gaps:284/853 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DEQQDLASLVVLLEELSKNTDYSTDLRISLGYYIEELLRHCLGRNDVSRRSAIVAAGSALQYCGK 105
            |.:...|.|:..:.:|:||  :..|:...||.|:|||.:.|:..::.......:.|...:|....
Human     3 DVEARFAHLLQPIRDLTKN--WEVDVAAQLGEYLEELDQICISFDEGKTTMNFIEAALLIQGSAC 65

  Fly   106 IYGDRVEYLCQVVEHQIEALLTSELQKETPSGSAAPEKNERRPEETRKRHPKKLTNKEVDPYLLT 170
            :|..:||||..:|...::.:          ||               ||..|:|::.:.|     
Human    66 VYSKKVEYLYSLVYQALDFI----------SG---------------KRRAKQLSSVQED----- 100

  Fly   171 LEPKRFKTMSDDKRFNAAGFVKCTRNRTIEYLYQDHTPPNLWKHAPIVDPHNPYDQDEKKQYKMF 235
                         |.|........:....|:|..|                              
Human   101 -------------RANGVASSGVPQEAENEFLSLD------------------------------ 122

  Fly   236 TYHVEHRYNTLLPDIPFERLNL-IKEYVHTNQVNTTEILNEHMTTKEYLDEYIALENQMLAARYG 299
                         |.|..|.|: :|.....::|....:|...:...:.:::    .|..|.:|.|
Human   123 -------------DFPDSRTNVDLKNDQTPSEVLIIPLLPMALVAPDEMEK----NNNPLYSRQG 170

  Fly   300 AIVTRRR-----RLVDSAR--FMEDNLDEGLAKKMCMDKNLPMDTNETVLIDQSLVDENSRSLTT 357
            .::..|:     ..|...|  ||.:  .||::         ||:                   ..
Human   171 EVLASRKDFRMNTCVPHPRGAFMLE--PEGMS---------PME-------------------PA 205

  Fly   358 AESTMGISQAENSTLKSSEVEATLSVSHIENSLSDSQEENPPLSSTLAINESSVLDSTRVDPIKD 422
            ..|.|..:|.:....:...:|.::..|.:. :|..|||..|.....:.:...             
Human   206 GVSPMPGTQKDTGRTEEQPMEVSVCRSPVP-ALGFSQEPGPSPEGPMPLGGG------------- 256

  Fly   423 LTLDELLLIDSGISMEELSDIQMHTAGQSFDDEGVVLSDLEDQRQLSPMLQMVSPSMEAKTLNII 487
                                          :||     |.|:..:| |.......::|.|.....
Human   257 ------------------------------EDE-----DAEEAVEL-PEASAPKAALEPKESRSP 285

  Fly   488 EMDADLIMNVPREVSYPILLNVMGLPIKRLRRKCIFKLP---PEFDLFRQARLPIKREGQQKSPT 549
            :..|.|    ||..   :|....|.|..   ..|:.:.|   ...|.|........::|:     
Human   286 QQSAAL----PRRY---MLREREGAPEP---ASCVKETPDPWQSLDPFDSLESKPFKKGR----- 335

  Fly   550 TPRTVLQIGREAPQNEREPGSPCSLE---------FDEDLNFLGFRQRRPTFDSGFDIEEPRVSS 605
             |.:|.....||...:|:......|:         :.:..:....|::.|:|   .|:|      
Human   336 -PYSVPPCVEEALGQKRKRKGAAKLQDFHQWYLAAYADHADSRRLRRKGPSF---ADME------ 390

  Fly   606 CVSTIGEVKTELEDEIEANTNNLTDASASDALNENVNDTKESGLGDSLAQELNASTEPNAENNTA 670
             |.....||.:||        .|......:...:.:...:|..|.||| ::|.|:.:        
Human   391 -VLYWTHVKEQLE--------TLRKLQRREVAEQWLRPAEEDHLEDSL-EDLGAAAD-------- 437

  Fly   671 NSSQLEVTATESSGTLSGLETTVDLGMESALVSSVLDLSTEPSAMD-SNIINVTQPDNSDLEIST 734
                            ..||....:..|.|......||...|.::. ..::.    .|.:|.|:|
Human   438 ----------------DFLEPEEYMEPEGADPREAADLDAVPMSLSYEELVR----RNVELFIAT 482

  Fly   735 VQD--QDTLHDEADANDLSAETPNPIADSAVDDCSLIRDWHRRLAPALEAAHERQNFNIKDLGTE 797
            .|.  |:|        :||..               ||||...:.|.|:...:...|:|...|.:
Human   483 SQKFVQET--------ELSQR---------------IRDWEDTVQPLLQEQEQHVPFDIHTYGDQ 524

  Fly   798 ILDICKAGNRTATLADVMADKDPSIMCRYMLASLVLTNHGNVSLDFENRDKSKPIDMSQFRM--H 860
            ::......|.....|:::|.:....:||.|||||.|.|...|.:. :.......:|....|:  |
Human   525 LVSRFPQLNEWCPFAELVAGQPAFEVCRSMLASLQLANDYTVEIT-QQPGLEMAVDTMSLRLLTH 588

  Fly   861 LKSMKRME 868
            .::.||.:
Human   589 QRAHKRFQ 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cap-H2NP_650014.2 CNDH2_C <769..862 CDD:465283 25/94 (27%)
NCAPH2NP_001171940.1 CNDH2_N 6..125 CDD:461866 34/206 (17%)
CNDH2_M 149..254 CDD:435617 23/139 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..331 33/226 (15%)
CNDH2_C 316..588 CDD:465283 67/348 (19%)

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