DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED7 and AT5G03220

DIOPT Version :9

Sequence 1:NP_731500.1 Gene:MED7 / 41288 FlyBaseID:FBgn0051390 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_195942.1 Gene:AT5G03220 / 831902 AraportID:AT5G03220 Length:168 Species:Arabidopsis thaliana


Alignment Length:162 Identity:59/162 - (36%)
Similarity:89/162 - (54%) Gaps:6/162 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PPERYIANYTDENIRRNRAPRPPPPPAQHEVYSMFGIQYNNDEMIRSLESQNIKRLIP--IHFDR 76
            ||..|...|.|.:...|.||.||||  ....|..||..|..::::.|||.|.:.:|.|  .:.|.
plant     8 PPPPYYRLYKDYSENPNSAPEPPPP--IEGTYVCFGGNYTTEDVLPSLEEQGVPQLYPKDSNLDY 70

  Fly    77 RKELKKLNHSLLVNFLDLIDFLILNPDSPRRTEKIDDISLLFVNMHHLLNEFRPHQARETLRVMM 141
            :.||:.||..|.::.|:|.|.|:..|.  :..::|.:||.:|.|:|||||..||||||.||..:|
plant    71 KNELRSLNRELQLHILELADVLVDRPS--QYAKRIGEISSIFKNLHHLLNSLRPHQARATLIHIM 133

  Fly   142 EMQKRQRVETAARFQKHLERVREIVNTAFSAL 173
            |:|.:||.:.....::..|..:.::..|:..|
plant   134 ELQIQQRKQAVEDIKRRREEAQRLLKDAYLTL 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED7NP_731500.1 Med7 8..166 CDD:283604 57/153 (37%)
AT5G03220NP_195942.1 Med7 <34..158 CDD:283604 45/125 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 102 1.000 Domainoid score I2299
eggNOG 1 0.900 - - E1_KOG0570
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3153
Inparanoid 1 1.050 106 1.000 Inparanoid score I2110
OMA 1 1.010 - - QHG57344
OrthoDB 1 1.010 - - D1356482at2759
OrthoFinder 1 1.000 - - FOG0004483
OrthoInspector 1 1.000 - - otm3172
orthoMCL 1 0.900 - - OOG6_103150
Panther 1 1.100 - - LDO PTHR21428
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3177
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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