DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED7 and let-49

DIOPT Version :10

Sequence 1:NP_731500.1 Gene:MED7 / 41288 FlyBaseID:FBgn0051390 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_493585.1 Gene:let-49 / 173353 WormBaseID:WBGene00002324 Length:253 Species:Caenorhabditis elegans


Alignment Length:167 Identity:64/167 - (38%)
Similarity:99/167 - (59%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VSSLPMPPERYIANYTDENIRRNRAPRPPPPPAQHEVYSMFGIQYN-NDEMIRSLESQNIKRLIP 71
            ||..|.||| |.:.||.:.|..:....||||....| :.::|.:|. .|::|..|::..:..|..
 Worm    10 VSPFPNPPE-YASAYTSDRINNDSGSAPPPPHPLTE-FKVYGEEYRLEDDVIAPLKNAGVAELYK 72

  Fly    72 IHFDRRKELKKLNHSLLVNFLDLIDFLILNPDSPRRTEKIDDISLLFVNMHHLLNEFRPHQARET 136
            ...:.:.|:||||.|.:|.|.||::.||..||.|.|.||:.|:..:|:|||||:|||||.|||::
 Worm    73 NKNNWKTEMKKLNRSAIVAFFDLVEILIRAPDHPMREEKMVDLHTIFINMHHLINEFRPVQARDS 137

  Fly   137 LRVMMEMQKRQRVETAARFQKHLERVREIVNTAFSAL 173
            :|::.|.|..:..:....|:|:|...||:|:..|..:
 Worm   138 VRILQERQIEELSDICKDFKKYLRDGREVVDDQFQMI 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED7NP_731500.1 Med7 8..166 CDD:461794 62/158 (39%)
let-49NP_493585.1 Med7 10..167 CDD:461794 62/158 (39%)

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