DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TkR86C and GALR3

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_003605.1 Gene:GALR3 / 8484 HGNCID:4134 Length:368 Species:Homo sapiens


Alignment Length:314 Identity:91/314 - (28%)
Similarity:155/314 - (49%) Gaps:32/314 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 IIFGLMMFVAIAGNGIVLWIV-----TGHRSMRTVTNYFLLNLSIADLLMSSLNCVFNF---IFM 144
            ::|.|:..:...|||:||.::     :..:...:.|:.|:|||::|||..  :.|...|   |:.
Human    22 VVFALIFLLGTVGNGLVLAVLLQPGPSAWQEPGSTTDLFILNLAVADLCF--ILCCVPFQATIYT 84

  Fly   145 LNSDWPFGSIYCTINNFVANVTVSTSVFTLVAISFDRYIAIVHPLKRRTSR--RKVRIILVLIWA 207
            |:: |.||::.|...:.:..:|:..|.|||.|:|.|||:|:.|||:.|..|  |..|..:.|:|.
Human    85 LDA-WLFGALVCKAVHLLIYLTMYASSFTLAAVSVDRYLAVRHPLRSRALRTPRNARAAVGLVWL 148

  Fly   208 LSCVLSAPCLLYSSIMTKHYYNGKSRTVCFMMWPDGRYPTSMADYAYNLIILVLTYGIPMIVMLI 272
            |:.:.|||.|.|..  |..|   .:..:|...|.|.|      ..|.::......|.:|:.|:.:
Human   149 LAALFSAPYLSYYG--TVRY---GALELCVPAWEDAR------RRALDVATFAAGYLLPVAVVSL 202

  Fly   273 CYSLMGRVLWGSRSIGENTDRQMES-MKSKRKVVRMFIAIVSIFAICWLPYH-LFFIYAYHNNQV 335
            .|....|.||.  ::|.......|: .::..:..|..:|:.:::|:||.|:| |...:.|.....
Human   203 AYGRTLRFLWA--AVGPAGAAAAEARRRATGRAGRAMLAVAALYALCWGPHHALILCFWYGRFAF 265

  Fly   336 ASTKYVQHMYLGFYWLAMSNAMVNPLIYYWMNKRFRMYFQRIICCCCVGLTRHR 389
            :...|.  ..|..:.||.:|:.:|||:|...::.||..|:|:  ..|....|||
Human   266 SPATYA--CRLASHCLAYANSCLNPLVYALASRHFRARFRRL--WPCGRRRRHR 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 85/297 (29%)
TM helix 1 85..111 CDD:320512 7/27 (26%)
TM helix 2 118..144 CDD:320512 11/28 (39%)
TM helix 3 156..186 CDD:320512 12/29 (41%)
TM helix 4 197..218 CDD:320512 7/20 (35%)
TM helix 5 251..280 CDD:320512 5/28 (18%)
TM helix 6 299..329 CDD:320512 8/30 (27%)
TM helix 7 342..367 CDD:320512 8/24 (33%)
GALR3NP_003605.1 7tmA_Gal2_Gal3_R 18..302 CDD:320225 85/297 (29%)
TM helix 1 19..45 CDD:320225 7/22 (32%)
TM helix 2 57..83 CDD:320225 10/27 (37%)
TM helix 3 95..125 CDD:320225 12/29 (41%)
TM helix 4 137..157 CDD:320225 7/19 (37%)
TM helix 5 181..210 CDD:320225 5/28 (18%)
TM helix 6 228..258 CDD:320225 8/29 (28%)
TM helix 7 270..295 CDD:320225 9/26 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.